Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56588 | Canola | cytosol | 66.04 | 69.14 |
| CDY38168 | Canola | cytosol | 64.55 | 67.05 |
| Bra039907.1-P | Field mustard | cytosol | 64.18 | 66.67 |
| KRH39814 | Soybean | cytosol, nucleus | 23.88 | 52.03 |
| AT5G45600.1 | Thale cress | nucleus | 49.63 | 49.63 |
Protein Annotations
| MapMan:12.4.6.2 | MapMan:15.3.5.3.14 | Gene3D:2.60.40.1970 | EntrezGene:816312 | ProteinID:AAD20126.1 | ProteinID:AEC06713.1 |
| ProteinID:AEC06714.1 | ArrayExpress:AT2G18000 | EnsemblPlantsGene:AT2G18000 | RefSeq:AT2G18000 | TAIR:AT2G18000 | RefSeq:AT2G18000-TAIR-G |
| EnsemblPlants:AT2G18000.2 | TAIR:AT2G18000.2 | EMBL:AY463616 | ncoils:Coil | UniProt:F4IPK2 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0030154 | GO:GO:0035267 | GO:GO:0043981 | GO:GO:0048510 | GO:GO:2000028 | InterPro:IPR005033 |
| InterPro:IPR038704 | RefSeq:NP_001189547.1 | RefSeq:NP_179391.1 | PFAM:PF03366 | PO:PO:0000293 | PFscan:PS51037 |
| PANTHER:PTHR23195 | PANTHER:PTHR23195:SF39 | Symbol:TAF14 | UniParc:UPI0001E92D79 | InterPro:YEAST_sf | InterPro:YEATS |
Description
TAF14Transcription initiation factor TFIID subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:F4IPK2]
Coordinates
chr2:+:7828976..7830898
Molecular Weight (calculated)
30364.4 Da
IEP (calculated)
5.638
GRAVY (calculated)
-0.274
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDIEILSE ADASMRKLRI FGIDDREDEN GRRRIKDVEV YVPIVCGSIA FYLGKKATEY RTHKWTVYVR GATNEDLGVV IKRVIFHLHP SFNNPTRVVD
101: APPFALSECG WGEFKIDITV FFHTDVCEKK LELSHVLKLN PENAYGPIPK SIKIPVVAES YNEVVFPDPF ESFVARVHNH PAIQISNIPD GLNLPPPGVA
201: DTYYLMEKGD TKEHPLSPWF LKFSEVEELF KLTAARQKVQ ADIAKLKRQL IMVDGQPEGL ESSSGYEC
101: APPFALSECG WGEFKIDITV FFHTDVCEKK LELSHVLKLN PENAYGPIPK SIKIPVVAES YNEVVFPDPF ESFVARVHNH PAIQISNIPD GLNLPPPGVA
201: DTYYLMEKGD TKEHPLSPWF LKFSEVEELF KLTAARQKVQ ADIAKLKRQL IMVDGQPEGL ESSSGYEC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.