Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034259.1-P | Field mustard | cytosol | 35.44 | 36.87 |
| CDY35352 | Canola | cytosol | 35.44 | 36.87 |
| CDY11520 | Canola | cytosol | 33.01 | 35.79 |
| CDY69272 | Canola | cytosol | 33.01 | 34.34 |
| Bra007789.1-P | Field mustard | nucleus | 31.55 | 34.21 |
| CDX76751 | Canola | cytosol | 29.61 | 30.96 |
| AT1G70910.1 | Thale cress | cytosol | 17.96 | 22.98 |
| AT1G57730.1 | Thale cress | cytosol | 15.53 | 18.39 |
Protein Annotations
| ArrayExpress:AT2G25565 | EnsemblPlants:AT2G25565.1 | EnsemblPlantsGene:AT2G25565 | EntrezGene:817095 | GO:GO:0005575 | GO:GO:0008150 |
| PO:PO:0001016 | PO:PO:0025281 | ProteinID:AAM15103.1 | ProteinID:AAM15232.1 | ProteinID:AEC07716.1 | RefSeq:AT2G25565 |
| RefSeq:AT2G25565-TAIR-G | RefSeq:NP_180127.1 | TAIR:AT2G25565 | TAIR:AT2G25565.1 | Unigene:At.52913 | UniParc:UPI00000AAC31 |
| UniProt:Q8RUZ7 | MapMan:35.2 | : | : | : | : |
Description
C3HC4-type RING finger protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ7]
Coordinates
chr2:-:10884062..10885295
Molecular Weight (calculated)
23299.1 Da
IEP (calculated)
4.791
GRAVY (calculated)
0.072
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: METGDMKFAI TTKIFSQTTY LPLSLNNTVC IINLRQQFKR YVIDKSNGSI TFNGLYPGPP LPISQIRLNL LNYKFTPFHL FPLLDSRLHD PSLSKYIAEV
101: ITGQASLSVG FLQRLFMFVN VVLTQEVFSV IPVSCLPKEE TQEVEDESTC PICLENFLND YVNDEVFSVI PKCAVENLWN DNDKNQITTN CHIVCIGFIK
201: DISSSG
101: ITGQASLSVG FLQRLFMFVN VVLTQEVFSV IPVSCLPKEE TQEVEDESTC PICLENFLND YVNDEVFSVI PKCAVENLWN DNDKNQITTN CHIVCIGFIK
201: DISSSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.