Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005207.1-P | Field mustard | cytosol | 84.54 | 85.66 |
| TraesCS7A01G085800.1 | Wheat | cytosol | 15.74 | 60.53 |
| AT4G15236.1 | Thale cress | cytosol, nucleus, plasma membrane | 55.55 | 57.63 |
| AT4G15215.11 | Thale cress | cytosol | 55.83 | 57.62 |
| AT4G15230.1 | Thale cress | cytosol | 55.13 | 56.79 |
| TraesCS5D01G163600.1 | Wheat | plasma membrane | 56.59 | 56.71 |
| TraesCS5B01G155600.1 | Wheat | plasma membrane | 54.72 | 56.64 |
| OQU78699 | Sorghum | cytosol, nucleus, plasma membrane | 57.35 | 55.58 |
| TraesCS5B01G155500.3 | Wheat | plasma membrane | 57.7 | 55.58 |
| Zm00001d015022_P001 | Maize | plastid | 7.63 | 55.28 |
| TraesCS7D01G080300.1 | Wheat | cytosol, nucleus, plasma membrane | 52.64 | 54.18 |
| OQU91495 | Sorghum | cytosol, nucleus, plasma membrane | 46.12 | 54.06 |
| KXG22958 | Sorghum | cytosol, nucleus, plasma membrane | 56.8 | 53.88 |
| AT1G15210.1 | Thale cress | plastid | 50.9 | 50.9 |
| Zm00001d009216_P001 | Maize | cytosol | 9.92 | 50.0 |
| Zm00001d034566_P001 | Maize | cytosol | 8.25 | 49.38 |
| Zm00001d004097_P001 | Maize | cytosol | 10.06 | 45.89 |
| Os01t0724400-00 | Rice | cytosol | 3.68 | 30.46 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:818305 | UniProt:A0A1P8B220 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 |
| InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | ProteinID:ANM62947.1 | ArrayExpress:AT2G37280 | EnsemblPlantsGene:AT2G37280 |
| RefSeq:AT2G37280 | TAIR:AT2G37280 | RefSeq:AT2G37280-TAIR-G | EnsemblPlants:AT2G37280.3 | Unigene:At.53057 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | RefSeq:NP_001325068.1 | InterPro:P-loop_NTPase |
| Symbol:PDR5 | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF259 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| UniParc:UPI0008492878 | SEG:seg | : | : | : | : |
Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
Coordinates
chr2:+:15650235..15656539
Molecular Weight (calculated)
163702.0 Da
IEP (calculated)
7.980
GRAVY (calculated)
0.092
Length
1442 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKVLDIFS
0201: FGCFLLQMCE SCLLFFSLFY FPQCYGEISY NGHGLNEVVP QKTSAYISQH DLHIAEMTTR ETIDFSARCQ GVGSRTDIMM EVSKREKDGG IIPDPEIDAY
0301: MKAISVKGLK RSLQTDYILK ILGLDICAET LVGNAMKRGI SGGQKKRLTT AEMIVGPTKA LFMDEITNGL DSSTAFQIIK SLQQVAHITN ATVFVSLLQP
0401: APESYDLFDD IVLMAEGKIV YHGPRDDVLK FFEECGFQCP ERKGVADFLQ EVISKKDQGQ YWLHQNLPHS FVSVDTLSKR FKDLEIGRKI EEALSKPYDI
0501: SKTHKDALSF NVYSLPKWEL FRACISREFL LMKRNYFVYL FKTFQLVLAA IITMTVFIRT RMDIDIIHGN SYMSCLFFAT VVLLVDGIPE LSMTVQRLSV
0601: FYKQKQLCFY PAWAYAIPAT VLKIPLSFFE SLVWTCLTYY VIGYTPEPYR FFRQFMILFA VHFTSISMFR CIAAIFQTGV AAMTAGSFVM LITFVFAGFA
0701: IPYTDMPGWL KWGFWVNPIS YAEIGLSVNE FLAPRWQKMQ PTNVTLGRTI LESRGLNYDD YMYWVSLSAL LGLTIIFNTI FTLALSFLKS PTSSRPMISQ
0801: DKLSELQGTK DSSVKKNKPL DSSIKTNEDP GKMILPFKPL TITFQDLNYY VDVPVEMKGQ GYNEKKLQLL SEITGAFRPG VLTALMGISG AGKTTLLDVL
0901: AGRKTSGYIE GEIRISGFLK VQETFARVSG YCEQTDIHSP SITVEESLIY SAWLRLVPEI NPQTKIRFVK QVLETIELEE IKDALVGVAG VSGLSTEQRK
1001: RLTVAVELVA NPSIIFMDEP TTGLDARAAA IVMRAVKNVA ETGRTIVCTI HQPSIHIFEA FDELVLLKRG GRMIYSGPLG QHSSCVIEYF QNIPGVAKIR
1101: DKYNPATWML EVTSESVETE LDMDFAKIYN ESDLYKNNSE LVKELSKPDH GSSDLHFKRT FAQNWWEQFK SCLWKMSLSY WRSPSYNLMR IGHTFISSFI
1201: FGLLFWNQGK KIDTQQNLFT VLGAIYGLVL FVGINNCTSA LQYFETERNV MYRERFAGMY SAFAYALAQV VTEIPYIFIQ SAEFVIVIYP MIGFYASFSK
1301: VFWSLYAMFC NLLCFNYLAM FLISITPNFM VAAILQSLFF TTFNIFAGFL IPKPQIPKWW VWFYYITPTS WTLNLFFSSQ YGDIHQKINA FGETKTVASF
1401: LEDYFGFHHD RLMITAIILI AFPIALATMY AFFVAKLNFQ KR
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKVLDIFS
0201: FGCFLLQMCE SCLLFFSLFY FPQCYGEISY NGHGLNEVVP QKTSAYISQH DLHIAEMTTR ETIDFSARCQ GVGSRTDIMM EVSKREKDGG IIPDPEIDAY
0301: MKAISVKGLK RSLQTDYILK ILGLDICAET LVGNAMKRGI SGGQKKRLTT AEMIVGPTKA LFMDEITNGL DSSTAFQIIK SLQQVAHITN ATVFVSLLQP
0401: APESYDLFDD IVLMAEGKIV YHGPRDDVLK FFEECGFQCP ERKGVADFLQ EVISKKDQGQ YWLHQNLPHS FVSVDTLSKR FKDLEIGRKI EEALSKPYDI
0501: SKTHKDALSF NVYSLPKWEL FRACISREFL LMKRNYFVYL FKTFQLVLAA IITMTVFIRT RMDIDIIHGN SYMSCLFFAT VVLLVDGIPE LSMTVQRLSV
0601: FYKQKQLCFY PAWAYAIPAT VLKIPLSFFE SLVWTCLTYY VIGYTPEPYR FFRQFMILFA VHFTSISMFR CIAAIFQTGV AAMTAGSFVM LITFVFAGFA
0701: IPYTDMPGWL KWGFWVNPIS YAEIGLSVNE FLAPRWQKMQ PTNVTLGRTI LESRGLNYDD YMYWVSLSAL LGLTIIFNTI FTLALSFLKS PTSSRPMISQ
0801: DKLSELQGTK DSSVKKNKPL DSSIKTNEDP GKMILPFKPL TITFQDLNYY VDVPVEMKGQ GYNEKKLQLL SEITGAFRPG VLTALMGISG AGKTTLLDVL
0901: AGRKTSGYIE GEIRISGFLK VQETFARVSG YCEQTDIHSP SITVEESLIY SAWLRLVPEI NPQTKIRFVK QVLETIELEE IKDALVGVAG VSGLSTEQRK
1001: RLTVAVELVA NPSIIFMDEP TTGLDARAAA IVMRAVKNVA ETGRTIVCTI HQPSIHIFEA FDELVLLKRG GRMIYSGPLG QHSSCVIEYF QNIPGVAKIR
1101: DKYNPATWML EVTSESVETE LDMDFAKIYN ESDLYKNNSE LVKELSKPDH GSSDLHFKRT FAQNWWEQFK SCLWKMSLSY WRSPSYNLMR IGHTFISSFI
1201: FGLLFWNQGK KIDTQQNLFT VLGAIYGLVL FVGINNCTSA LQYFETERNV MYRERFAGMY SAFAYALAQV VTEIPYIFIQ SAEFVIVIYP MIGFYASFSK
1301: VFWSLYAMFC NLLCFNYLAM FLISITPNFM VAAILQSLFF TTFNIFAGFL IPKPQIPKWW VWFYYITPTS WTLNLFFSSQ YGDIHQKINA FGETKTVASF
1401: LEDYFGFHHD RLMITAIILI AFPIALATMY AFFVAKLNFQ KR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.