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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026157.1-P Field mustard plastid 90.64 89.4
CDY36535 Canola plastid 90.29 89.18
CDY39620 Canola plastid 89.81 88.58
VIT_09s0002g03550.t01 Wine grape cytosol, mitochondrion, peroxisome, plasma membrane 33.29 74.07
VIT_09s0002g03570.t01 Wine grape plasma membrane 15.95 71.43
TraesCS7A01G356100.3 Wheat plasma membrane 61.37 68.29
VIT_09s0002g03560.t01 Wine grape endoplasmic reticulum, golgi, plastid 19.42 65.73
TraesCS7B01G271600.1 Wheat plasma membrane 68.24 65.12
HORVU7Hr1G088600.3 Barley plasma membrane 67.41 65.06
TraesCS7D01G366500.1 Wheat plasma membrane 66.99 64.88
TraesCS7D01G366600.1 Wheat plasma membrane 68.1 64.73
AT2G37280.3 Thale cress cytosol, nucleus, plasma membrane 50.9 50.9
AT4G15230.1 Thale cress cytosol 48.41 49.86
AT4G15215.11 Thale cress cytosol 48.13 49.68
AT4G15236.1 Thale cress cytosol, nucleus, plasma membrane 47.64 49.42
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:838087UniProt:A0A178WAD4InterPro:AAA+_ATPaseProteinID:AAD39650.1
InterPro:ABCG_PDR_1InterPro:ABCG_PDR_2InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeProteinID:AEE29285.1
ArrayExpress:AT1G15210EnsemblPlantsGene:AT1G15210RefSeq:AT1G15210TAIR:AT1G15210RefSeq:AT1G15210-TAIR-GEnsemblPlants:AT1G15210.1
TAIR:AT1G15210.1Unigene:At.26863ProteinID:DAA00875.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005886GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0009507
GO:GO:0009536GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
InterPro:IPR003439RefSeq:NP_172973.1ProteinID:OAP15156.1InterPro:P-loop_NTPaseSymbol:PDR7InterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PO:PO:0000037PO:PO:0001078
PO:PO:0001081PO:PO:0004507PO:PO:0005052PO:PO:0007611PO:PO:0007616PO:PO:0009005
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009046PO:PO:0009052PO:PO:0020100
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF224UniProt:Q7PC86SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0000162D8ESEG:seg:::
Description
ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
Coordinates
chr1:-:5231345..5236886
Molecular Weight (calculated)
162579.0 Da
IEP (calculated)
8.002
GRAVY (calculated)
0.045
Length
1442 amino acids
Sequence
(BLAST)
0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.