Factsheet for VIT_09s0002g03570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	15.22	61.25
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	23.6	41.76
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	15.22	36.03
VIT_06s0080g00050.t01	Wine grape	plasma membrane	16.15	31.33
VIT_07s0005g02250.t01	Wine grape	plasma membrane	29.5	28.61
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	99.07	21.37
TraesCS7A01G356100.3	Wheat	plasma membrane	75.47	18.75
VIT_09s0002g03630.t01	Wine grape	plasma membrane	74.22	16.95
TraesCS7D01G366500.1	Wheat	plasma membrane	74.84	16.19
TraesCS7B01G271600.1	Wheat	plasma membrane	75.78	16.15
HORVU7Hr1G088600.3	Barley	plasma membrane	74.84	16.13
TraesCS7D01G366600.1	Wheat	plasma membrane	75.78	16.08
AT1G15210.1	Thale cress	plastid	71.43	15.95
CDY36535	Canola	plastid	71.74	15.82
Bra026157.1-P	Field mustard	plastid	71.43	15.73
CDY39620	Canola	plastid	71.12	15.66
VIT_09s0002g05490.t01	Wine grape	mitochondrion	58.07	14.62
VIT_09s0002g05590.t01	Wine grape	plasma membrane	58.39	12.93
VIT_09s0002g05600.t01	Wine grape	mitochondrion	58.07	12.9
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	57.45	12.87
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	58.07	12.82
VIT_09s0002g05570.t01	Wine grape	plasma membrane	57.76	12.79
VIT_09s0002g05360.t01	Wine grape	plasma membrane	58.7	12.69
VIT_04s0008g04820.t01	Wine grape	plastid	54.35	12.33
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	52.17	12.19
VIT_06s0061g01470.t01	Wine grape	mitochondrion	42.24	12.12
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	58.07	11.96
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.55	11.68
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	51.55	11.68
VIT_13s0074g00660.t01	Wine grape	plastid	52.8	11.55
VIT_13s0074g00700.t01	Wine grape	plastid	52.48	11.42
VIT_05s0020g00680.t01	Wine grape	plastid	50.0	11.2
VIT_06s0061g01480.t01	Wine grape	plastid	50.31	11.1
VIT_06s0080g00040.t01	Wine grape	plastid	48.76	10.43
VIT_11s0016g04590.t01	Wine grape	cytosol	46.58	10.16
VIT_18s0001g10650.t01	Wine grape	mitochondrion	4.66	8.93
VIT_02s0012g02770.t01	Wine grape	cytosol	1.55	5.49
VIT_09s0002g05450.t01	Wine grape	mitochondrion	3.42	4.7
VIT_04s0043g00970.t01	Wine grape	mitochondrion	1.55	3.25
VIT_14s0030g00590.t01	Wine grape	cytosol	1.55	3.03
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	4.04	2.78
VIT_09s0002g05510.t01	Wine grape	cytosol	0.93	1.47
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	1.55	1.17
VIT_09s0002g03580.t01	Wine grape	plasma membrane	2.17	1.01
VIT_09s0002g05440.t01	Wine grape	cytosol	0.31	0.78
VIT_09s0002g06940.t01	Wine grape	cytosol	0.31	0.42
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.62	0.26
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_07s0005g02330.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	InterPro:ABC_2_trans	ProteinID:CBI36063	ProteinID:CBI36063.3	UniProt:D7U0B7	EMBL:FN596494
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	PFAM:PF01061	PANTHER:PTHR19241
PANTHER:PTHR19241:SF437	TMHMM:TMhelix	UniParc:UPI00015C8480	ArrayExpress:VIT_09s0002g03570	EnsemblPlantsGene:VIT_09s0002g03570	EnsemblPlants:VIT_09s0002g03570.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:3244575..3245960

Molecular Weight (calculated)

37511.5 Da

IEP (calculated)

9.285

GRAVY (calculated)

0.329

Length

322 amino acids

Sequence
(BLAST)

001: MDFAEHYKSS SLNQRNKALV KELSTPPPGA KDLYFLTQYS QSIWGQFKSC IWKQWWTYWR SPDYNLVRFS FTLAAALLVG TIFWKVGTKR ENTNDLTMII
101: GAMYAAVLFV GINNCSTVQP IVAVERTVFY RERAAGMYSA MPYAMAQVVA EIPYVFFQTA YYSLIVYALV SFQWTAAKFF WFFFVSFFSF LYFTYYGMMT
201: VSITPNHQVA SIFAAAFYAV FNLFSGFFIP RPKIPKWWIW YYWICPLAWT VYGLIVSQYG DLEDTIKVPG MSPDPTIKWY VQNHFGYDPN FMAPVAVVLV
301: GFGVFFAFMY AYCIKTLNFQ MR

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.