Factsheet for VIT_06s0061g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00040.t01	Wine grape	plastid	93.22	90.37
VIT_06s0061g01470.t01	Wine grape	mitochondrion	64.93	84.49
VIT_09s0002g06940.t01	Wine grape	cytosol	13.22	80.42
VIT_09s0002g05510.t01	Wine grape	cytosol	10.82	77.45
VIT_09s0002g05380.t01	Wine grape	cytosol	7.81	77.03
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.99	76.27
VIT_09s0002g05440.t01	Wine grape	cytosol	6.64	75.78
VIT_13s0074g00660.t01	Wine grape	plastid	75.89	75.27
VIT_13s0074g00700.t01	Wine grape	plastid	76.3	75.27
KRG96158	Soybean	endoplasmic reticulum	73.7	74.0
Solyc11g007290.1.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	70.68	70.35
VIT_12s0057g00280.t01	Wine grape	cytosol	2.95	69.35
VIT_09s0018g00900.t01	Wine grape	mitochondrion	6.51	66.9
VIT_07s0005g02330.t01	Wine grape	cytosol	6.71	66.67
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	6.16	66.18
VIT_02s0012g02770.t01	Wine grape	cytosol	4.04	64.84
VIT_06s0080g00050.t01	Wine grape	plasma membrane	7.26	63.86
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	13.08	62.62
VIT_09s0002g05490.t01	Wine grape	mitochondrion	54.11	61.77
VIT_09s0002g05470.t01	Wine grape	cytosol	11.23	61.42
VIT_09s0002g05600.t01	Wine grape	mitochondrion	60.82	61.24
VIT_09s0002g05590.t01	Wine grape	plasma membrane	60.96	61.21
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	60.82	60.86
VIT_09s0002g05570.t01	Wine grape	plasma membrane	60.34	60.59
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	59.45	60.4
VIT_04s0008g04820.t01	Wine grape	plastid	57.19	58.84
VIT_09s0002g05360.t01	Wine grape	plasma membrane	59.66	58.5
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	25.62	57.72
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	29.79	57.01
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	16.58	56.81
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	57.74	56.46
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	60.34	56.33
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	3.08	56.25
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.38	55.88
VIT_09s0002g06930.t01	Wine grape	mitochondrion	10.07	55.06
VIT_09s0002g03630.t01	Wine grape	plasma membrane	52.6	54.47
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	52.53	53.98
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	51.16	52.27
VIT_11s0016g04590.t01	Wine grape	cytosol	52.74	52.13
VIT_05s0020g00680.t01	Wine grape	plastid	51.16	51.98
VIT_09s0002g03580.t01	Wine grape	plasma membrane	24.38	51.59
VIT_09s0002g03570.t01	Wine grape	plasma membrane	11.1	50.31
VIT_04s0043g00970.t01	Wine grape	mitochondrion	5.21	49.35
VIT_14s0030g00590.t01	Wine grape	cytosol	5.34	47.27
VIT_18s0001g10650.t01	Wine grape	mitochondrion	5.27	45.83
VIT_07s0005g02250.t01	Wine grape	plasma membrane	9.32	40.96
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	5.62	40.59
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	4.52	36.26
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	11.51	35.97
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	5.68	33.74
VIT_09s0002g05450.t01	Wine grape	mitochondrion	5.34	33.33

Protein Annotations

EntrezGene:100248292	wikigene:100248292	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:CBI17067	ProteinID:CBI17067.3	UniProt:D7SN38
EMBL:FN594957	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	EntrezGene:LOC100248292	wikigene:LOC100248292	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF429
SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	TIGR:TC60592	TMHMM:TMhelix	UniParc:UPI0001BE0E4B
ArrayExpress:VIT_06s0061g01480	EnsemblPlantsGene:VIT_06s0061g01480	EnsemblPlants:VIT_06s0061g01480.t01	RefSeq:XP_002267191	RefSeq:XP_002267191.2	SEG:seg

Description

No Description!

Coordinates

chr6:-:19347365..19360240

Molecular Weight (calculated)

165129.0 Da

IEP (calculated)

6.490

GRAVY (calculated)

0.070

Length

1460 amino acids

Sequence
(BLAST)

0001: MLVGILAMAA ALAGDDLSRS GSSASSSRSW RSASIREVWN APDVFQRSSR QVADDEEELK WAAIERLPTY DRMRKGMLKQ VMSDGRIVQN EVDVSHLGAQ
0101: DKRQLMESIL KVVEDDNERF LTSLRDRIDR VGIEIPKIEV RFQNLSIEGD GYVGTRALPT LLNSTLNAVE GVMGMIGLSP SKKRVVKILQ EVSGIIRPSR
0201: MTLLLGPPAS GKTTFLKALS GEPDDDLRMT GKITYCGHEF SEFVPQRTCA YISQHDLHYG EMTVRETLNF SGRCLGVGTR YEMLVELSRR EKEAAIKPDP
0301: EIDAFMKATA MAGQETSLIT DYVLKILGLE ICADIMVGDE MRRGISGGQK KRVTTGEMLV GPAKTFFMDE ISTGLDSSTT FQIVKFMKQM VHIMDITMVI
0401: SLLQPPPETY DLFDDIILLS EGKIVYQGPR ENVLEFFEHM GFRCPERKGV ADFLQEVTSK KDQEQYWFRK NQPYRHISVP EFARSFNSFH VGQRISEDIR
0501: VPYDKSKAHP AALVKEKYGI SNWELFRACF SREWLLMKRS SFVYIFKATQ LLIMGTIAMT VFLRTEMKYG QLEDATKFWG ALFFSLINVM FNGVQELAMT
0601: VFRLPVFFKQ RDFLFYPAWA FAMPIWVLRI PVSLIESGVW IGLTYYTIGF APAASRFFKQ FLAFFGVHQM ALSLFRFIAA VGRTPVAANT LGSFTLLIVF
0701: VLGGYVVARV DIEPWMIWGY YASPMMYGQN AIAINEFLDE RWNNPVTNST DSVGVTLLKE KGLFSEEHWY WICVGVLFAF SLLFNVLFIA ALSFFNSPGD
0801: TKSLLLEDNS DDNGRRQLTS NNEGIDMSVR NAQAGSSSAI GAANNESRKG MVLPFQPLPL AFNHVNYYVD MPAEMKSQGE EDRLQLLRDV SGAFRPGILT
0901: ALVGVSGAGK TTLMDVLAGR KTGGYIEGSI SISGYPKNQA TFARVSGYCE QNDIHSPYVT VYESLLYSAW LRLASDVKDS TRKMFVEEVM DLVELHPLRH
1001: ALVGLPGVDG LSTEQRKRLT IAVELVANPS IIFMDEPTSG LDARAAAIVM RTVRNTVDTG RTVVCTIHQP SIDIFEAFDE LLLMKRGGQV IYAGPLGRQS
1101: HMLVEYFESV PGVTKIKEGY NPATWMLEVS TSAVEAQLDI DFAEVFANSA LYRRNQDLIN ELSTPAPGSK DLYFPTQYSQ SFVTQCKACF WKQRYSYWRN
1201: SEYNAIRFFM TIVIGVLFGV IFWSKGDQIH KQQELINLLG ATYAAILFLG ASNATAVQPV VAVERTVFYR ERAAGMYSEL PYAFAQVAIE TIYVAIQTLV
1301: YVLLLYSMIG FQWKVDKFFY FYYFIFMCFT YFSLYGMMVV ALTPGHQIAA IVSSFFFNFW NLFSGFLIPR PLIPIWWRWY YWASPVAWTI YGIFASQVGD
1401: ITTDLEITGS SPMPVNEFIK ENLGFDHDFL VPVVFAHVGW VFLFFFVFAY GIKFLNFQRR

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.