Factsheet for VIT_18s0001g10650.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g02770.t01	Wine grape	cytosol	47.62	87.91
VIT_12s0057g00280.t01	Wine grape	cytosol	30.95	83.87
VIT_04s0043g00970.t01	Wine grape	mitochondrion	52.98	57.79
VIT_14s0030g00590.t01	Wine grape	cytosol	54.17	55.15
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	38.1	20.98
VIT_09s0002g06940.t01	Wine grape	cytosol	20.83	14.58
VIT_07s0005g02250.t01	Wine grape	plasma membrane	25.6	12.95
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	22.62	8.92
VIT_09s0002g05490.t01	Wine grape	mitochondrion	50.6	6.65
VIT_04s0008g04820.t01	Wine grape	plastid	54.76	6.48
VIT_06s0061g01470.t01	Wine grape	mitochondrion	42.86	6.42
VIT_09s0002g05600.t01	Wine grape	mitochondrion	52.38	6.07
VIT_09s0002g05590.t01	Wine grape	plasma membrane	52.38	6.05
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	51.79	5.96
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	50.6	5.92
VIT_09s0002g05570.t01	Wine grape	plasma membrane	49.4	5.71
VIT_09s0002g05360.t01	Wine grape	plasma membrane	49.4	5.57
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.24	5.52
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	51.19	5.5
VIT_05s0020g00680.t01	Wine grape	plastid	46.43	5.43
VIT_11s0016g04590.t01	Wine grape	cytosol	46.43	5.28
VIT_06s0061g01480.t01	Wine grape	plastid	45.83	5.27
VIT_06s0080g00040.t01	Wine grape	plastid	46.43	5.18
Solyc11g007290.1.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	44.64	5.11
VIT_09s0002g03630.t01	Wine grape	plasma membrane	42.86	5.11
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	42.86	5.07
VIT_13s0074g00700.t01	Wine grape	plastid	44.05	5.0
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.67	4.93
VIT_13s0074g00660.t01	Wine grape	plastid	42.86	4.89
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	41.07	4.83
VIT_09s0002g03570.t01	Wine grape	plasma membrane	8.93	4.66
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	41.07	4.62
VIT_09s0002g05510.t01	Wine grape	cytosol	3.57	2.94
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	7.14	2.57
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	2.38	2.2
VIT_09s0002g05440.t01	Wine grape	cytosol	1.19	1.56
VIT_09s0002g03580.t01	Wine grape	plasma membrane	2.98	0.72
VIT_06s0080g00050.t01	Wine grape	plasma membrane	0.6	0.6
VIT_09s0002g05450.t01	Wine grape	mitochondrion	0.6	0.43
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_07s0005g02330.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_18s0001g10650	EMBL:FN595227	EnsemblPlants:VIT_18s0001g10650.t01	EnsemblPlantsGene:VIT_18s0001g10650	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437
ProteinID:CCB45852	ProteinID:CCB45852.1	UniParc:UPI000210AC92	UniProt:F6H002	MapMan:35.1	:

Description

No Description!

Coordinates

chr18:-:8963588..8967926

Molecular Weight (calculated)

19085.9 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.035

Length

168 amino acids

Sequence
(BLAST)

001: MKKRLLYLEP RLQLGALGRT VVCTIHQPSI DIFDAFDEVR YLSNGGEEIY ASPLEHHSAH LIRYFEVRSI NTRDSRYSPY LPLVTGISHV LKGIDGVSKI
101: KDGYNSATWM LEVTSAAQEA ALGINFTDVY KNSELYSTTL DPCFYEYDLM FVFSRAQLGV CVLKNIVY

Best Arabidopsis Sequence Match ( AT1G15520.2 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVLQKNIIE SEIYDFSLRK PQIQTSICSR FSSRSHTFSC KR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.