Factsheet for VIT_13s0074g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0074g00660.t01	Wine grape	plastid	95.5	89.4
VIT_13s0074g00700.t01	Wine grape	plastid	93.61	87.16
VIT_09s0002g06940.t01	Wine grape	cytosol	12.99	74.58
VIT_09s0002g05380.t01	Wine grape	cytosol	7.91	73.65
VIT_06s0061g01480.t01	Wine grape	plastid	76.27	71.99
VIT_09s0002g05440.t01	Wine grape	cytosol	6.68	71.88
VIT_09s0002g05510.t01	Wine grape	cytosol	10.45	70.59
VIT_06s0061g01470.t01	Wine grape	mitochondrion	57.4	70.5
VIT_06s0080g00040.t01	Wine grape	plastid	75.18	68.79
VIT_09s0018g00900.t01	Wine grape	mitochondrion	6.97	67.61
VIT_07s0005g02330.t01	Wine grape	cytosol	7.11	66.67
VIT_02s0012g02770.t01	Wine grape	cytosol	4.35	65.93
VIT_12s0057g00280.t01	Wine grape	cytosol	2.9	64.52
VIT_09s0002g05470.t01	Wine grape	cytosol	11.61	59.93
VIT_09s0002g05490.t01	Wine grape	mitochondrion	55.15	59.42
VIT_09s0002g05590.t01	Wine grape	plasma membrane	62.34	59.08
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	62.48	59.01
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	61.32	58.8
VIT_09s0002g05600.t01	Wine grape	mitochondrion	61.83	58.76
VIT_09s0002g05570.t01	Wine grape	plasma membrane	61.68	58.46
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	12.84	58.03
VIT_04s0008g04820.t01	Wine grape	plastid	59.14	57.43
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	17.56	56.81
VIT_09s0002g05360.t01	Wine grape	plasma membrane	61.03	56.48
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	26.49	56.33
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	60.67	55.99
VIT_06s0080g00050.t01	Wine grape	plasma membrane	6.68	55.42
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	5.44	55.15
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	30.48	55.05
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.31	54.61
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	61.83	54.48
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	55.66	53.98
VIT_09s0002g03630.t01	Wine grape	plasma membrane	55.01	53.76
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	3.12	53.75
VIT_09s0002g03570.t01	Wine grape	plasma membrane	12.19	52.17
VIT_09s0002g03580.t01	Wine grape	plasma membrane	25.98	51.88
VIT_05s0020g00680.t01	Wine grape	plastid	53.34	51.15
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	52.32	50.45
VIT_11s0016g04590.t01	Wine grape	cytosol	53.63	50.03
VIT_14s0030g00590.t01	Wine grape	cytosol	5.81	48.48
VIT_04s0043g00970.t01	Wine grape	mitochondrion	5.37	48.05
VIT_09s0002g06930.t01	Wine grape	mitochondrion	9.0	46.44
VIT_18s0001g10650.t01	Wine grape	mitochondrion	5.52	45.24
VIT_07s0005g02250.t01	Wine grape	plasma membrane	10.52	43.67
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	4.79	36.26
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	11.9	35.12
VIT_09s0002g05450.t01	Wine grape	mitochondrion	5.88	34.62
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	4.93	33.66
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	5.37	30.08

Protein Annotations

EntrezGene:100245341	wikigene:100245341	EntrezGene:100253970	wikigene:100253970	MapMan:24.1.3.2.2	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like
ProteinID:CCB62335	ProteinID:CCB62335.1	UniProt:F6I5W7	EMBL:FN596753	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100245341	wikigene:LOC100245341
EntrezGene:LOC100253970	wikigene:LOC100253970	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061
PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF261	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002109BEC	ArrayExpress:VIT_13s0074g00690	EnsemblPlantsGene:VIT_13s0074g00690	EnsemblPlants:VIT_13s0074g00690.t01
RefSeq:XP_002265196	RefSeq:XP_002265196.1	RefSeq:XP_002267345	RefSeq:XP_002267345.2	RefSeq:XP_003633486	RefSeq:XP_003633486.1
RefSeq:XP_003633487	RefSeq:XP_003633487.1	RefSeq:XP_003633488	RefSeq:XP_003633488.1	SEG:seg	:

Description

No Description!

Coordinates

chr13:-:8876000..8883078

Molecular Weight (calculated)

156465.0 Da

IEP (calculated)

7.452

GRAVY (calculated)

0.107

Length

1378 amino acids

Sequence
(BLAST)

0001: MLKQVLDDGK VVHEEVDFTN LGMQERKHHI ESILKVVEED NEKFLLRLRE RTDRVGVEIP KIEVRFEHLS IEGDAYVGTR ALPTLLNFTM NFIEGILGLI
0101: RLSPSKKRVV KILKDVSGIV KPSRMTLLLG PPASGKTTLL QALAGKMDKD LRMEGKITYC GHELSEFVPQ RTCAYISQHD LHHGEMTVRE TLDFSGRCLG
0201: VGTRYELLAE LSRREKEAGI KPDPEIDAFM KATAMAGQET SLVTDYVLKM LGLDICADIV LGDDMRRGIS GGEKKRVTTG EMLVGPAKAL FMDEISTGLD
0301: SSTTFQIVKF MRQMVHIMEV TMIISLLQPA PETYDLFDAI ILLCEGQIVY QGPRENILGF FESVGFKCPK RKGVADFLQE VTSRKDQEQY WFRNNKPYKY
0401: ISVPEFVQHF NSFHIGQKLS DDLGIPYNKS RTHPTALVTE KYGISNWELF KACFAREWLL MKRNSFIYIF KTTQITIMSV IAMTVFFRTE MKHGQLQNGV
0501: KFYGALFYSL INVMFNGMAE LALTLFRLPV FFKQRDFLFY PAWAFALPIW VLRIPLSFTE SGIWIILTYY TIGFAPSASR FFRQLLAFFG VHQMALSLFR
0601: FIAALGRTQI VANTLGTFTL LLVFVLGGFI VAKDDIEPWM IWGYYASPMM YGQNALVINE FLDDRWSAPN IDRRIPEPTV GKALLKARGM FVDGYWYWIC
0701: IGALTGFSLL FNICFIAALT YLNPPGDSKS VIIDEDDEEK SEKQFYSNKQ HDLTTPERNS ASTAPMGMVL PFQPLSLAFE HVNYYVDMPA GMKSQGIEVD
0801: RLQLLRDASG AFRPGILMAL VGVSGAGKTT LMDVLAGRKT GGYIEGSISV SGYPKDQATF PRISGYCEQN DIHSPNVTVY ESLVYSAWLR LAPDVKKETR
0901: QVFVEEVMDL IELHPLRDAL VGLPGIHGLS TEQRKRLTVA VELVANPSIL FMDEPTTGLD ARAAAVVMCT VRNTVDTGRT VVCTIHQPSI DIFEAFDELL
1001: LMKRGGQVIY AGPLGRNSHK LVEYFEAVPG VPKVRDGQNP ATWMLEVTSA AYEAQLGVDF AEIYAKSELY QRNQELIKEL STPSPGSKNL YFPTKYSQSF
1101: FTQCKACFWK QHWSYWRNPP YNAIRFFLTI IIGVLFGVIF WNKGEQIDKE QDLLNLLGAM FSAVFFLGAT NTAAVQPVVA IERTVFYRER AAGMYSALPY
1201: AFAQVVIETI YVAIQTLVYS LLLYSMMGFY WRVDKFLWFY YYLLMCFIYF TLYGMMIVAL TPSHQIAAIV MSFFLSFWNL FSGFLIPRMQ IPIWWRWYYW
1301: ASPVAWTIYG LVTSQVGNKE DPVQVPGAGV KSVKLYLKEA SGFEYDFLGA VALAHIGWVL LFLFVFAYGI KFLNFQRR

Best Arabidopsis Sequence Match ( AT2G36380.1 )
(BLAST)

0001: MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK
0101: EKKHLMEMIL KFVEEDNEKF LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP SKKRKIEILK DISGIIKPSR
0201: MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP
0301: EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI
0401: SLLQPAPETF ELFDDIILLS EGQIVYQGSR DNVLEFFEYM GFKCPERKGI ADFLQEVTSK KDQEQYWNRR EHPYSYVSVH DFSSGFNSFH AGQQLASEFR
0501: VPYDKAKTHP AALVTQKYGI SNKDLFKACF DREWLLMKRN SFVYVFKTVQ ITIMSLIAMT VYFRTEMHVG TVQDGQKFYG ALFFSLINLM FNGMAELAFT
0601: VMRLPVFFKQ RDFLFYPPWA FALPGFLLKI PLSLIESVIW IALTYYTIGF APSAARFFRQ LLAYFCVNQM ALSLFRFLGA LGRTEVIANS GGTLALLVVF
0701: VLGGFIISKD DIPSWLTWCY YTSPMMYGQT ALVINEFLDE RWGSPNNDTR INAKTVGEVL LKSRGFFTEP YWFWICIGAL LGFTVLFNFC YIIALMYLNP
0801: LGNSKATTVV EEGKDKHKGS HSGTGGSVVE LTSTSSHGPK KGMVLPFQPL SLAFNNVNYY VDMPAEMKAQ GVEGDRLQLL RDVGGAFRPG VLTALVGVSG
0901: AGKTTLMDVL AGRKTGGYVE GSINISGYPK NQATFARVSG YCEQNDIHSP HVTVYESLIY SAWLRLSADI DTKTREMFVE EVMELVELKP LRNSIVGLPG
1001: VDGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNTV DTGRTVVCTI HQPSIDIFES FDELLLMKRG GQVIYAGTLG HHSQKLVEYF
1101: EAIEGVPKIK DGYNPATWML DVTTPSMESQ MSVDFAQIFV NSSVNRRNQE LIKELSTPPP GSNDLYFRTK YAQPFSTQTK ACFWKMYWSN WRYPQYNAIR
1201: FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS
1301: MIGYDWTVVK FFWFYYYMLT CFVYFTLYGM MLVALTPNYQ IAGICLSFFL SFWNLFSGFL IPRPQIPIWW RWYYWASPVA WTLYGIITSQ VGDRDSIVHI
1401: TGVGDMSLKT LLKNGFGFDY DFLPVVAVVH IAWILIFLFA FAYGIKFLNF QRR

Arabidopsis Description

ABCG34ABC transporter G family member 34 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC87]
SUBAcon: [mitochondrion,peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.