Factsheet for VIT_12s0057g00280.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g02770.t01	Wine grape	cytosol	95.16	64.84
VIT_04s0043g00970.t01	Wine grape	mitochondrion	93.55	37.66
VIT_14s0030g00590.t01	Wine grape	cytosol	91.94	34.55
VIT_18s0001g10650.t01	Wine grape	mitochondrion	83.87	30.95
VIT_09s0002g06940.t01	Wine grape	cytosol	43.55	11.25
VIT_07s0005g02250.t01	Wine grape	plasma membrane	53.23	9.94
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	54.84	7.98
VIT_09s0002g05490.t01	Wine grape	mitochondrion	77.42	3.75
VIT_04s0008g04820.t01	Wine grape	plastid	83.87	3.66
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	83.87	3.62
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	83.87	3.56
VIT_06s0061g01470.t01	Wine grape	mitochondrion	62.9	3.48
VIT_09s0002g05590.t01	Wine grape	plasma membrane	80.65	3.44
VIT_09s0002g05600.t01	Wine grape	mitochondrion	79.03	3.38
VIT_09s0002g05570.t01	Wine grape	plasma membrane	79.03	3.37
VIT_09s0002g05360.t01	Wine grape	plasma membrane	77.42	3.22
VIT_11s0016g04590.t01	Wine grape	cytosol	75.81	3.18
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	79.03	3.13
VIT_05s0020g00680.t01	Wine grape	plastid	69.35	2.99
VIT_06s0061g01480.t01	Wine grape	plastid	69.35	2.95
VIT_09s0002g03630.t01	Wine grape	plasma membrane	66.13	2.91
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.52	2.9
VIT_06s0080g00040.t01	Wine grape	plastid	69.35	2.86
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	66.13	2.75
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.9	2.74
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	62.9	2.74
VIT_13s0074g00700.t01	Wine grape	plastid	64.52	2.7
VIT_13s0074g00660.t01	Wine grape	plastid	62.9	2.65
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	9.68	1.28
Zm00001d016409_P001	Maize	cytosol, peroxisome, plasma membrane	6.45	1.1
VIT_09s0002g05510.t01	Wine grape	cytosol	3.23	0.98
VIT_06s0080g00050.t01	Wine grape	plasma membrane	1.61	0.6
VIT_09s0002g03580.t01	Wine grape	plasma membrane	6.45	0.58
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	1.61	0.55
VIT_09s0002g05450.t01	Wine grape	mitochondrion	1.61	0.43
VIT_07s0005g02330.t01	Wine grape	cytosol	0.0	0.0
PGSC0003DMT400050157	Potato	plasma membrane	0.0	0.0
Solyc09g042300.1.1	Tomato	cytosol	0.0	0.0
Solyc12g044580.1.1	Tomato	plastid	0.0	0.0
TraesCS4A01G354600.1	Wheat	plasma membrane	0.0	0.0
TraesCS4D01G328300.1	Wheat	plasma membrane	0.0	0.0
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g03570.t01	Wine grape	plasma membrane	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_12s0057g00280	EMBL:FN595759	EnsemblPlants:VIT_12s0057g00280.t01	EnsemblPlantsGene:VIT_12s0057g00280	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437
ProteinID:CBI28386	ProteinID:CBI28386.3	UniParc:UPI00015CAD6A	UniProt:D7TD13	MapMan:35.1	:

Description

No Description!

Coordinates

chr12:-:8918659..8919113

Molecular Weight (calculated)

7028.4 Da

IEP (calculated)

5.456

GRAVY (calculated)

-0.126

Length

62 amino acids

Sequence
(BLAST)

1: MVCTIHQPSI DIFDAFDELF LLKRGGEEIY AGPLEHHSAH LIKYFEGIDG VSKIKYGYNQ AT

Best Arabidopsis Sequence Match ( AT3G30842.1 )
(BLAST)

0001: MAHYRVSSEV ENIMNRDRSH RKNEEEDEEE ALKLAAMEKL QRLPTYDRAR KAVLKGITGG FKEIDMKDLG LAERRELFDR VMTMDDEDWH GEYLRRLKSR
0101: FDRVSLHLPT IEVRFEDLNV TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP PGSGKSTLLK ALSGKTETGL
0201: RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
0301: GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ
0401: GPREDVLEFF EFMGFKCPER KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK NHRAALTRTT YGASKLELLK
0501: ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
0601: ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY
0701: IQTAVSVNEF RSESWKDGLG VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD SNNTTGRDYT GTTMERFFDR
0801: VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
0901: QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT
1001: SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE GYNPATWALE VTTRAQEDVL
1101: GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
1201: VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM
1301: VISVSPNQEI ASILNGVIST SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY YGYEYNFLWV VSLTLIAFSM
1401: FFVFIYAFSV KILNFQKR

Arabidopsis Description

ABCG38ABC transporter G family member 38 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.