Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050157 | Potato | plasma membrane | 44.38 | 32.42 |
| Bra026759.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 19.38 | 23.48 |
| TraesCS4A01G354600.1 | Wheat | plasma membrane | 35.62 | 23.36 |
| TraesCS4D01G328300.1 | Wheat | plasma membrane | 32.5 | 21.22 |
| Zm00001d016409_P001 | Maize | cytosol, peroxisome, plasma membrane | 42.5 | 18.78 |
| GSMUA_Achr7P05940_001 | Banana | plasma membrane | 30.62 | 14.63 |
| Solyc04g076170.1.1 | Tomato | cytosol | 16.88 | 14.29 |
| Solyc09g091670.2.1 | Tomato | plastid | 44.38 | 4.97 |
| Solyc05g053610.2.1 | Tomato | plastid | 43.12 | 4.84 |
| Solyc05g053600.2.1 | Tomato | extracellular, nucleus | 40.62 | 4.6 |
| Solyc11g007290.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 41.25 | 4.5 |
| Solyc12g100190.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 40.0 | 4.48 |
| Solyc05g053570.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 39.38 | 4.47 |
| Solyc08g067610.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 39.38 | 4.33 |
| Solyc06g036240.1.1 | Tomato | cytosol | 15.62 | 3.91 |
| PGSC0003DMT400092002 | Potato | cytosol | 1.88 | 1.75 |
| Solyc09g042300.1.1 | Tomato | cytosol | 0.62 | 1.16 |
| Solyc02g055540.1.1 | Tomato | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 0.62 | 0.46 |
| VIT_12s0057g00280.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDY68759 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc12g044580.1.1 | EnsemblPlantsGene:Solyc12g044580.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF224 | TMHMM:TMhelix | UniParc:UPI000276971C | UniProt:K4DFE4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr12:-:38286666..38287475
Molecular Weight (calculated)
18759.9 Da
IEP (calculated)
7.907
GRAVY (calculated)
0.540
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTTILFVGT NNCSTVQATV AVGTTIFYRE RAVGMYSITI CYGIEILYIF IQTTYCTLIV YTLFSFELTT RIPKWWIWYI WIHPVAWTVY RCIVSQYGDV
101: EDTIKVPGMS IDPKIKDYII DHFGYNPNFT GLVAIVLVDF AIFFAFVYFY SIKTLNFQRR
101: EDTIKVPGMS IDPKIKDYII DHFGYNPNFT GLVAIVLVDF AIFFAFVYFY SIKTLNFQRR
0001: MDYNPNLPPL GGGGVSMRRS ISRSVSRASR NIEDIFSSGS RRTQSVNDDE EALKWAAIEK LPTYSRLRTT LMNAVVEDDV YGNQLMSKEV DVTKLDGEDR
0101: QKFIDMVFKV AEQDNERILT KLRNRIDRVG IKLPTVEVRY EHLTIKADCY TGNRSLPTLL NVVRNMGESA LGMIGIQFAK KAQLTILKDI SGVIKPGRMT
0201: LLLGPPSSGK TTLLLALAGK LDKSLQVSGD ITYNGYQLDE FVPRKTSAYI SQNDLHVGIM TVKETLDFSA RCQGVGTRYD LLNELARREK DAGIFPEADV
0301: DLFMKASAAQ GVKNSLVTDY TLKILGLDIC KDTIVGDDMM RGISGGQKKR VTTGEMIVGP TKTLFMDEIS TGLDSSTTFQ IVKCLQQIVH LNEATVLMSL
0401: LQPAPETFDL FDDIILVSEG QIVYQGPRDN ILEFFESFGF KCPERKGTAD FLQEVTSKKD QEQYWVNPNR PYHYIPVSEF ASRYKSFHVG TKMSNELAVP
0501: FDKSRGHKAA LVFDKYSVSK RELLKSCWDK EWLLMQRNAF FYVFKTVQIV IIAAITSTLF LRTEMNTRNE GDANLYIGAL LFGMIINMFN GFAEMAMMVS
0601: RLPVFYKQRD LLFYPSWTFS LPTFLLGIPS SILESTAWMV VTYYSIGFAP DASRFFKQFL LVFLIQQMAA SLFRLIASVC RTMMIANTGG ALTLLLVFLL
0701: GGFLLPKGKI PDWWGWAYWV SPLTYAFNGL VVNEMFAPRW MNKMASSNST IKLGTMVLNT WDVYHQKNWY WISVGALLCF TALFNILFTL ALTYLNPLGK
0801: KAGLLPEEEN EDADQGKDPM RRSLSTADGN RRGEVAMGRM SRDSAAEASG GAGNKKGMVL PFTPLAMSFD DVKYFVDMPG EMRDQGVTET RLQLLKGVTG
0901: AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGDVRI SGFPKVQETF ARISGYCEQT DIHSPQVTVR ESLIFSAFLR LPKEVGKDEK MMFVDQVMEL
1001: VELDSLRDSI VGLPGVTGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRA VRNTVDTGRT VVCTIHQPSI DIFEAFDELM LMKRGGQVIY
1101: AGPLGQNSHK VVEYFESFPG VSKIPEKYNP ATWMLEASSL AAELKLSVDF AELYNQSALH QRNKALVKEL SVPPAGASDL YFATQFSQNT WGQFKSCLWK
1201: QWWTYWRSPD YNLVRFIFTL ATSLLIGTVF WQIGGNRSNA GDLTMVIGAL YAAIIFVGIN NCSTVQPMVA VERTVFYRER AAGMYSAMPY AISQVTCELP
1301: YVLIQTVYYS LIVYAMVGFE WKAEKFFWFV FVSYFSFLYW TYYGMMTVSL TPNQQVASIF ASAFYGIFNL FSGFFIPRPK IPKWWIWYYW ICPVAWTVYG
1401: LIVSQYGDVE TRIQVLGGAP DLTVKQYIED HYGFQSDFMG PVAAVLIAFT VFFAFIFAFC IRTLNFQTR
0101: QKFIDMVFKV AEQDNERILT KLRNRIDRVG IKLPTVEVRY EHLTIKADCY TGNRSLPTLL NVVRNMGESA LGMIGIQFAK KAQLTILKDI SGVIKPGRMT
0201: LLLGPPSSGK TTLLLALAGK LDKSLQVSGD ITYNGYQLDE FVPRKTSAYI SQNDLHVGIM TVKETLDFSA RCQGVGTRYD LLNELARREK DAGIFPEADV
0301: DLFMKASAAQ GVKNSLVTDY TLKILGLDIC KDTIVGDDMM RGISGGQKKR VTTGEMIVGP TKTLFMDEIS TGLDSSTTFQ IVKCLQQIVH LNEATVLMSL
0401: LQPAPETFDL FDDIILVSEG QIVYQGPRDN ILEFFESFGF KCPERKGTAD FLQEVTSKKD QEQYWVNPNR PYHYIPVSEF ASRYKSFHVG TKMSNELAVP
0501: FDKSRGHKAA LVFDKYSVSK RELLKSCWDK EWLLMQRNAF FYVFKTVQIV IIAAITSTLF LRTEMNTRNE GDANLYIGAL LFGMIINMFN GFAEMAMMVS
0601: RLPVFYKQRD LLFYPSWTFS LPTFLLGIPS SILESTAWMV VTYYSIGFAP DASRFFKQFL LVFLIQQMAA SLFRLIASVC RTMMIANTGG ALTLLLVFLL
0701: GGFLLPKGKI PDWWGWAYWV SPLTYAFNGL VVNEMFAPRW MNKMASSNST IKLGTMVLNT WDVYHQKNWY WISVGALLCF TALFNILFTL ALTYLNPLGK
0801: KAGLLPEEEN EDADQGKDPM RRSLSTADGN RRGEVAMGRM SRDSAAEASG GAGNKKGMVL PFTPLAMSFD DVKYFVDMPG EMRDQGVTET RLQLLKGVTG
0901: AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGDVRI SGFPKVQETF ARISGYCEQT DIHSPQVTVR ESLIFSAFLR LPKEVGKDEK MMFVDQVMEL
1001: VELDSLRDSI VGLPGVTGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRA VRNTVDTGRT VVCTIHQPSI DIFEAFDELM LMKRGGQVIY
1101: AGPLGQNSHK VVEYFESFPG VSKIPEKYNP ATWMLEASSL AAELKLSVDF AELYNQSALH QRNKALVKEL SVPPAGASDL YFATQFSQNT WGQFKSCLWK
1201: QWWTYWRSPD YNLVRFIFTL ATSLLIGTVF WQIGGNRSNA GDLTMVIGAL YAAIIFVGIN NCSTVQPMVA VERTVFYRER AAGMYSAMPY AISQVTCELP
1301: YVLIQTVYYS LIVYAMVGFE WKAEKFFWFV FVSYFSFLYW TYYGMMTVSL TPNQQVASIF ASAFYGIFNL FSGFFIPRPK IPKWWIWYYW ICPVAWTVYG
1401: LIVSQYGDVE TRIQVLGGAP DLTVKQYIED HYGFQSDFMG PVAAVLIAFT VFFAFIFAFC IRTLNFQTR
Arabidopsis Description
ABCG36ABC transporter G family member 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE2]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.