Factsheet for Solyc06g036240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g067610.2.1	Tomato	cytosol, peroxisome, plasma membrane	55.78	24.55
Solyc05g053570.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	50.31	22.84
Solyc05g053600.2.1	Tomato	extracellular, nucleus	49.84	22.59
Solyc05g053610.2.1	Tomato	plastid	49.84	22.39
Solyc09g091670.2.1	Tomato	plastid	48.44	21.71
Solyc12g100190.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	47.97	21.5
Solyc11g007290.1.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	45.47	19.84
Solyc02g055540.1.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus, vacuole	6.25	18.35
PGSC0003DMT400074382	Potato	cytosol	2.97	16.96
Solyc12g044580.1.1	Tomato	plastid	3.91	15.62
KRH72672	Soybean	plasma membrane	5.94	13.87
Solyc04g076170.1.1	Tomato	cytosol	3.91	13.23
VIT_06s0080g00050.t01	Wine grape	plasma membrane	1.88	7.23
CDY55993	Canola	endoplasmic reticulum, extracellular	0.16	4.0
CDY55994	Canola	extracellular	0.31	3.17
Solyc09g042300.1.1	Tomato	cytosol	0.31	2.33

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:K4C4Z2	InterPro:P-loop_NTPase	PFAM:PF00005	PANTHER:PTHR19241
PANTHER:PTHR19241:SF443	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g036240.1	EnsemblPlants:Solyc06g036240.1.1	TMHMM:TMhelix	UniParc:UPI0002765F55

Description

No Description!

Coordinates

chr6:+:25709842..25716466

Molecular Weight (calculated)

72149.5 Da

IEP (calculated)

8.325

GRAVY (calculated)

0.062

Length

640 amino acids

Sequence
(BLAST)

001: MRLVDLDLPT IQVGSFDQLS VDAETCVGDR GVPTILNFTI NILELSIREK EANIKPDPDV DIFMKAGQDA SVVTDYILKP ARETYNLVGD IVLLSDGPIA
101: YQDKFQSFHI GQKLGDELGV PFHKSQSHPA ALTTQRYRVS KKELLKGCSA REFLLMKRNT FICIFKIVYN CTRIKQGMRV CTWVHCCCND DYVQWILSIV
201: KLPVFYRQGE FLFFSAWMAS ALFCLLAAVG RNLIVANTLG SFALLTVMVM GGFIVSRGNI SSSVEKLQVQ YTTYMFTLSE WWIWGCWFLP LIYAQNAIAV
301: NEFLGKSWAF TEDRLELLKG VSGAFRPGVL TALMGVTGAG KTTMIDVLAR RKTGGHIEGS ITYIRVPHEA RNICLNIYES LQYSAWLQLP QEVDSATRRV
401: NLRNKKNHSV ELVSSPSTRF MDEPISALNA TAAAIVMRIV RNEVDTGRTV TNNLILLQLT AAATSKMGGE ETYVVPLGHH SFQLIKYFET KEGYNPATWM
501: LEITAAAQEG NFLESTLQNC TRTQSCTMGR QQDLFNAIGS MYAAVMFLSV RNSSTVQPII SIDRTVFYRK REAGMYSALP SCFWEVAEVS YIKRCHLAIH
601: HLKVNTTFAR RTFTHRWELV VENFVYSTDV LCARLISWNN

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.