Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22908117
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g053610.2.1 | Tomato | plastid | 83.75 | 83.93 |
| Solyc05g053570.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 79.34 | 80.35 |
| Solyc05g053600.2.1 | Tomato | extracellular, nucleus | 78.64 | 79.53 |
| Solyc12g100190.1.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 77.45 | 77.45 |
| Solyc08g067610.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 70.03 | 68.78 |
| Solyc11g007290.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 60.71 | 59.1 |
| Solyc06g036240.1.1 | Tomato | cytosol | 21.71 | 48.44 |
| Solyc04g076170.1.1 | Tomato | cytosol | 5.88 | 44.44 |
| Solyc12g044580.1.1 | Tomato | plastid | 4.97 | 44.38 |
| Solyc09g042300.1.1 | Tomato | cytosol | 2.59 | 43.02 |
| Solyc02g055540.1.1 | Tomato | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 6.37 | 41.74 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0055085 | InterPro:IPR003439 | UniProt:K4CWJ3 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 |
| PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF444 |
| SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc09g091670.2 | EnsemblPlants:Solyc09g091670.2.1 | TMHMM:TMhelix | UniParc:UPI000276B5B2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:70922357..70929669
Molecular Weight (calculated)
161186.0 Da
IEP (calculated)
6.445
GRAVY (calculated)
0.029
Length
1428 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPLDLSNLR GRSIRGSMRE NSNSIWRNNG VEVFSRSNRD EDDEEALKWA ALEKLPTYDR LRKGILFGSQ GVTAQVDVDD LGVSQRKSLL ERLVKVADED
0101: NEKFLLKLKN RIDRVGIDFP SIEVRFEHLN IEADAYVGSR ALPTFTNFIS NFIESLLDSI HITPSKKRSV TILKDVSGYV KPCRMTLLLG PPGSGKTTLL
0201: LALAGKLDSD LRVTGKVTYN GHELHEFVPQ RTAAYISQHD LHIGEMTVRE TLEFSARCQG VGSRYEMLAE LSRREKAANI KPDVDIDMFM KAISTEGQES
0301: KVITDYILKI LGLDICADTM VGDQMIRGIS GGQKKRVTTG EMIVGPSKAL FMDEISTGLD SSTTYSIVNS LKQSVQILKG TALISLLQPA PETYNLFDDI
0401: ILLSDGYIVY QGPREDVLEF FESMGFKCPD RKGVADFLQE VTSKKDQQQY WVRRDEPYRF ITSKEFAEAY QSFHVGRKVS NELSTAFDKS KSHPAALTTE
0501: KYGIGKKQLL KVCTEREFLL MQRNSFVYIF KFFQLMVIAL MTMTIFFRTE MPRDTATDGG IYAGALFFTV VMLMFNGLSE LPLALYKLPV FYKQRDFLFY
0601: PSWAYAIPSW ILKIPVTFLE VGMWTFLTYY VIGFDPNVGR FFKQFLLLVL VNQMASGLFR FIAAVGRTMG VASTFGACAL LLQFALGGFA LARTDVKDWW
0701: IWGYWTSPLM YSVNAILVNE FDGEKWKHTA PNGTEPLGPS VVRSRGFFPD AYWYWIGIGA LAGFTILFNI AYSLALVYLN PFGKPQATIS EEGENNESSG
0801: SSSQITSTTE GDSVDENQNK KKGMVLPFEP HSITFDEVVY SVDMPPEMRE QGSSDRLVLL KGVSGAFRPG VLTALMGVSG AGKTTLMDVL AGRKTGGYID
0901: GSIKISGYPK KQETFARISG YCEQNDIHSP YVTVHESLVY SAWLRLPQDV DEHKRMMFVE EVMDLVELTP LRSALVGLPG VNGLSTEQRK RLTIAVELVA
1001: NPSIIFMDEP TSGLDARAAA IVMRAVRNTV DTGRTVVCTI HQPSIDIFEA FDELFLMKRG GQEIYVGPLG RESCHLIKYF ESMPGVGKIE EGYNPATWML
1101: EVTSSSQEMS LGVDFTELYK NSDLCRRNKA LITELSVPRP GTSDLHFENQ FSQPFWVQCM ACLWKQHWSY WRNPAYTAVR FLFTTFIALM FGSMFWDLGT
1201: KVSRPQDLTN AMGSMYAAVL FLGVQNASSV QPVVSVERTV FYREKAAGMY SAIPYAFAQV FIEIPYVFVQ AVVYGLIVYS MIGFEWTVAK FFWYFFFMFF
1301: TFLYFTFFGM MTVAITPNQN VASIVAGFFY TVWNLFSGFI VPRPRIPIWW RWYYWACPVA WTLYGLIASQ FADLQDIVNG QTVEEYLRND YGIKHDFLGV
1401: VAGVIVAFAV VFAFTFALGI KAFNFQRR
0101: NEKFLLKLKN RIDRVGIDFP SIEVRFEHLN IEADAYVGSR ALPTFTNFIS NFIESLLDSI HITPSKKRSV TILKDVSGYV KPCRMTLLLG PPGSGKTTLL
0201: LALAGKLDSD LRVTGKVTYN GHELHEFVPQ RTAAYISQHD LHIGEMTVRE TLEFSARCQG VGSRYEMLAE LSRREKAANI KPDVDIDMFM KAISTEGQES
0301: KVITDYILKI LGLDICADTM VGDQMIRGIS GGQKKRVTTG EMIVGPSKAL FMDEISTGLD SSTTYSIVNS LKQSVQILKG TALISLLQPA PETYNLFDDI
0401: ILLSDGYIVY QGPREDVLEF FESMGFKCPD RKGVADFLQE VTSKKDQQQY WVRRDEPYRF ITSKEFAEAY QSFHVGRKVS NELSTAFDKS KSHPAALTTE
0501: KYGIGKKQLL KVCTEREFLL MQRNSFVYIF KFFQLMVIAL MTMTIFFRTE MPRDTATDGG IYAGALFFTV VMLMFNGLSE LPLALYKLPV FYKQRDFLFY
0601: PSWAYAIPSW ILKIPVTFLE VGMWTFLTYY VIGFDPNVGR FFKQFLLLVL VNQMASGLFR FIAAVGRTMG VASTFGACAL LLQFALGGFA LARTDVKDWW
0701: IWGYWTSPLM YSVNAILVNE FDGEKWKHTA PNGTEPLGPS VVRSRGFFPD AYWYWIGIGA LAGFTILFNI AYSLALVYLN PFGKPQATIS EEGENNESSG
0801: SSSQITSTTE GDSVDENQNK KKGMVLPFEP HSITFDEVVY SVDMPPEMRE QGSSDRLVLL KGVSGAFRPG VLTALMGVSG AGKTTLMDVL AGRKTGGYID
0901: GSIKISGYPK KQETFARISG YCEQNDIHSP YVTVHESLVY SAWLRLPQDV DEHKRMMFVE EVMDLVELTP LRSALVGLPG VNGLSTEQRK RLTIAVELVA
1001: NPSIIFMDEP TSGLDARAAA IVMRAVRNTV DTGRTVVCTI HQPSIDIFEA FDELFLMKRG GQEIYVGPLG RESCHLIKYF ESMPGVGKIE EGYNPATWML
1101: EVTSSSQEMS LGVDFTELYK NSDLCRRNKA LITELSVPRP GTSDLHFENQ FSQPFWVQCM ACLWKQHWSY WRNPAYTAVR FLFTTFIALM FGSMFWDLGT
1201: KVSRPQDLTN AMGSMYAAVL FLGVQNASSV QPVVSVERTV FYREKAAGMY SAIPYAFAQV FIEIPYVFVQ AVVYGLIVYS MIGFEWTVAK FFWYFFFMFF
1301: TFLYFTFFGM MTVAITPNQN VASIVAGFFY TVWNLFSGFI VPRPRIPIWW RWYYWACPVA WTLYGLIASQ FADLQDIVNG QTVEEYLRND YGIKHDFLGV
1401: VAGVIVAFAV VFAFTFALGI KAFNFQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVLQKNIIE SEIYDFSLRK PQIQTSICSR FSSRSHTFSC KR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVLQKNIIE SEIYDFSLRK PQIQTSICSR FSSRSHTFSC KR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.