Factsheet for Solyc08g067610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	74.14	73.89
VIT_09s0002g05490.t01	Wine grape	mitochondrion	64.99	73.89
VIT_09s0002g05590.t01	Wine grape	plasma membrane	73.87	73.87
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	72.56	73.42
VIT_09s0002g05570.t01	Wine grape	plasma membrane	73.04	73.04
CDY65846	Canola	mitochondrion, plastid	14.72	71.81
KRH09796	Soybean	mitochondrion	70.01	71.39
VIT_09s0002g05360.t01	Wine grape	plasma membrane	72.35	70.65
Solyc05g053600.2.1	Tomato	extracellular, nucleus	68.43	70.47
Solyc05g053610.2.1	Tomato	plastid	68.91	70.32
Solyc05g053570.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	68.16	70.28
Solyc09g091670.2.1	Tomato	plastid	68.78	70.03
Solyc12g100190.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	67.68	68.91
KXG32868	Sorghum	plasma membrane	68.71	68.75
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	72.56	67.46
Solyc11g007290.1.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.8	58.28
Solyc06g036240.1.1	Tomato	cytosol	24.55	55.78
Solyc09g042300.1.1	Tomato	cytosol	2.82	47.67
Solyc04g076170.1.1	Tomato	cytosol	5.78	44.44
Solyc02g055540.1.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus, vacuole	6.33	42.2
Solyc12g044580.1.1	Tomato	plastid	4.33	39.38

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:K4CLY7	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF443
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc08g067610.2	EnsemblPlants:Solyc08g067610.2.1	TMHMM:TMhelix	UniParc:UPI000276C47A
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:56616917..56623386

Molecular Weight (calculated)

164413.0 Da

IEP (calculated)

6.826

GRAVY (calculated)

0.076

Length

1454 amino acids

Sequence
(BLAST)

0001: MEGGENLVRV SSARLSGSNV WRNSAMDVFS RSSSREDYDD EEALRWAALE KLPTYSRIRR GLLLEEEGQS REVDITKLDL IERRNLLDRL VKIADEDNEK
0101: LLMKLKQRID RVGLDLPTIE VRFEHLNVDA EARVGSRALP TIFNFTVNIL EDFLNYIHIL PSRKKPLPIL HGVSGIIKPG RMTLLLGPPS SGKTTLLLGL
0201: AGKLDKDLKV SGRVTYNGHG MDEFVPQRTS AYISQNDLHI GEMTVRETLA FSARCQGVGD KYEILAELSR REKEANIKPD PDVDIFMKSA WNEGQEANVI
0301: TDYTLKILGL EICADTLVGD EMIRGISGGQ RKRLTTGEMM VGPARALFMD EISTGLDSST TYQIVNSIRQ SIHILQGTAV ISLLQPAPET YDLFDDIILL
0401: SDGKIVYQGP RENVLEFFEY MGFKCPERKG VADFLQEVTS RKDQEQYWSR RDEPYRFITS CEFSDVFQSF HVGRKLGEEL AVPFDKSKSH PAALTTKRYG
0501: ISKKELLKAC AAREYLLMKR NSFVYIFKMV QLTMMASIAM TLFLRTEMHR DTTIDGAVYL GALFYAVITV MFNGFSELAL SIMKLPSFYK QRDLLFFPAW
0601: AYALPTWILK IPITLVEIAI WVCMTYYVIG FEADVGRFFK QLFLLICLNQ MASGLFRFLA ALGRNIIVAN TFGSCALLVV LVMGGFILSR DDVKQWLIWG
0701: YWTSPMMYAQ NAIAVNEFLG KSWSHVPPNS TGTDTLGVSF LKSRGIFPEA RWYWIGAGAL IGYVLLFNFL FTVALAYLNP FGKPQAIISE EIVVERIASK
0801: RGEVIELSPI GKSSSERGND VAISASSRSL SSRVGNITEG DLSKRRGMIL PFEPLSITFD DIRYAVDMPQ EMKAQGFIED RLELLKGVSG AFRPGVLTAL
0901: MGVSGAGKTT LMDVLAGRKT GGYINGTISI SGYPKQQETF ARISGYCEQT DIHSPHVTVY ESLQYSAWLR LPREVDTETR KNFIEEVMEL VELIPLREAL
1001: VGLPGVNGLS TEQRKRLTVA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFDAFDELL LLKRGGEEIF VGPLGRHSSH
1101: LIKYFEGIDG VLKIRDGYNP ATWMLEVTSL AQEAVLGIDF TELYKNSELY RRNKALIQEL SVAAPGSKDL YFETEYSQSF FTQCMACLWK QHLSYWRNPP
1201: YTAVRLMFTF FVSLMLGTIF WGLGSKRGRQ QDILNAIGSM YSAILFLGII NATSVQPVVA IERTVFYRER AAGMYSALPY AFGQVMIELP HLFLQTIIYG
1301: VIVYAMIGFE WTVAKFFWYL FFMYFTLLYF TLYGMMTVAV TPNHTIASIV SSAFYTIWNL FCGFVVPKTR MPVWWRWYYY VCPLSWTLYG LIASQFGDVQ
1401: DKLDTKETVE QFLENFFDYK HDFVGYVAVI LVGISVAFLF IFAYSIKAFN FQKR

Best Arabidopsis Sequence Match ( AT2G26910.1 )
(BLAST)

0001: MWNSAENAFS RSTSFKDEIE DEEELRWAAL QRLPTYSRIR RGIFRDMVGE PKEIQIGNLE ASEQRLLLDR LVNSVENDPE QFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR

Arabidopsis Description

ABCG32PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.