Factsheet for VIT_09s0002g05490.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g06940.t01	Wine grape	cytosol	16.26	86.67
VIT_09s0002g05440.t01	Wine grape	cytosol	8.52	85.16
VIT_09s0002g05510.t01	Wine grape	cytosol	13.45	84.31
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	5.24	83.75
VIT_09s0002g05360.t01	Wine grape	plasma membrane	95.31	81.87
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	98.83	80.82
VIT_09s0002g05600.t01	Wine grape	mitochondrion	90.23	79.59
VIT_09s0018g00900.t01	Wine grape	mitochondrion	8.84	79.58
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	87.33	77.73
VIT_09s0002g05590.t01	Wine grape	plasma membrane	88.27	77.65
VIT_12s0057g00280.t01	Wine grape	cytosol	3.75	77.42
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	88.12	77.24
VIT_09s0002g05570.t01	Wine grape	plasma membrane	87.72	77.17
VIT_02s0012g02770.t01	Wine grape	cytosol	5.32	74.73
VIT_09s0002g05380.t01	Wine grape	cytosol	8.29	71.62
KRH09796	Soybean	mitochondrion	77.01	69.07
PGSC0003DMT400034124	Potato	plastid	76.08	68.19
VIT_04s0008g04820.t01	Wine grape	plastid	72.79	65.61
VIT_09s0002g06930.t01	Wine grape	mitochondrion	13.68	65.54
Solyc08g067610.2.1	Tomato	cytosol, peroxisome, plasma membrane	73.89	64.99
KXG32868	Sorghum	plasma membrane	71.54	62.97
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	9.77	61.88
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	19.7	59.15
VIT_09s0002g03570.t01	Wine grape	plasma membrane	14.62	58.07
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	33.85	56.75
VIT_14s0030g00590.t01	Wine grape	cytosol	7.27	56.36
VIT_04s0043g00970.t01	Wine grape	mitochondrion	6.72	55.84
VIT_07s0005g02330.t01	Wine grape	cytosol	6.41	55.78
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.85	55.66
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.42	55.15
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	60.75	54.68
CDY65846	Canola	mitochondrion, plastid	12.67	54.36
VIT_06s0061g01480.t01	Wine grape	plastid	61.77	54.11
VIT_13s0074g00700.t01	Wine grape	plastid	62.08	53.65
VIT_13s0074g00660.t01	Wine grape	plastid	61.53	53.46
VIT_11s0016g04590.t01	Wine grape	cytosol	61.61	53.35
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	62.24	53.32
VIT_06s0061g01470.t01	Wine grape	mitochondrion	46.68	53.21
VIT_06s0080g00040.t01	Wine grape	plastid	60.75	51.59
VIT_09s0002g03630.t01	Wine grape	plasma membrane	55.9	50.71
VIT_18s0001g10650.t01	Wine grape	mitochondrion	6.65	50.6
VIT_09s0002g05450.t01	Wine grape	mitochondrion	9.07	49.57
VIT_05s0020g00680.t01	Wine grape	plastid	52.7	46.9
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	23.3	45.99
VIT_09s0002g05470.t01	Wine grape	cytosol	9.54	45.69
VIT_07s0005g02250.t01	Wine grape	plasma membrane	11.49	44.28
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	6.25	43.96
VIT_06s0080g00050.t01	Wine grape	plasma membrane	5.55	42.77
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	4.46	41.91
VIT_09s0002g03580.t01	Wine grape	plasma membrane	21.19	39.28
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	6.65	34.55
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	8.13	22.27

Protein Annotations

EntrezGene:100244707	wikigene:100244707	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:CCB59532	ProteinID:CCB59532.1	UniProt:F6HX62
EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	EntrezGene:LOC100244707	wikigene:LOC100244707	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210A4E4	ArrayExpress:VIT_09s0002g05490	EnsemblPlantsGene:VIT_09s0002g05490
EnsemblPlants:VIT_09s0002g05490.t01	RefSeq:XP_003632800	RefSeq:XP_003632800.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:5216536..5223507

Molecular Weight (calculated)

144153.0 Da

IEP (calculated)

7.295

GRAVY (calculated)

0.089

Length

1279 amino acids

Sequence
(BLAST)

0001: MATADIYRAS GSLRRNGSSI WRSSGADVFS RSSRDEDDEE ALKWAALEKL PTYNRLRRGL LMGSEGEASE IDIHNLGFQD KKNLVERLVK VAEEDNEKFL
0101: LKLKNRIDRV GIDVPEIEVR FEHLTIDAEA FVGSRALPSF HNFIFSKLEG ILNAVRILPS KKRKFTILND VSGIIKPRRL TLLLGPPSSG KTTLLLALAG
0201: KLDPNLKVMG RVTYNGHGMN EFVPQRTAAY ISQHDTHIGE MTVRETLAFS ARCQGVGDRY DMLAELSRRE KAANIKPDPD LDVFMKAAAT EGQKENVVTD
0301: YTLKILGLDI CADTMVGDEM IRGISGGQRK RVTTGEMLVG PSKALFMDEI STGLDSSTTY QIINSLKQTI HILNGTAVIS LLQPLAVMAV IAMTLFLRTE
0401: MHKNSTDDGN IYTGALFFTV VMIMFNGMAE LAMAIAKLPV FYKQRDLLFY PAWAYALPTW VLKIPITFVE VGVWVFITYY VIGFDPNVER LFRQYLLLLL
0501: VNQMASGLFR FIAAAGRNMI VANTFGAFAL LMLLALGGFI LSYDNVKKWW IWGYWSSPLM YAQNAIVVNE FLGKSWSKNV TDSTESLGVT VLKSRGFFTD
0601: AHWYWIGAGA LLGFIFVFNI FYTLCLNYLN PFEKPQAVII EESDNAKTAT TERGEQMVEA IAEANHNKKK GMVLPFQPHS ITFDDIRYSV DMPEEMKSQG
0701: ALEDRLELLK GVSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKTGGYIEG NITISGYPKK QETFARISGY CEQNDIHSPH VTVHESLLYS AWLRLPSDVN
0801: SETRKMFIEE VMELVELTPL RDALVGLPGV NGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFEAF
0901: DELLLMKRGG QEIYVGTLGR HSSHLINYFE GIEGVSKIKD GYNPATWMLE VTTGAQEGTL GVDFTEIYKN SDLYRRNKDL IKELSQPAPG TKDLYFATQY
1001: SQPFFTQFLA CLWKQRWSYW RNPPYTAVRF LFTTFIALMF GTMFWDLGTE RTRQQDLLNA MGSMYAAVLF LGVQNAQSVQ PVVVVERTVF YRERAAGMYS
1101: ALPYAFGQAL VEIPYVFAQA VVYGVIVYAM IGFEWTAAKF FWYLFFMFFT LLYFTFYGMM AVAATPNQNI ASIVAATFYT LWNLFSGFIV PRNRIPVWWR
1201: WYYWICPVAW TLYGLVTSQF GDIQDTLLDK NQTVKQFLDD YFGFKHDFLG VVAAVVVGFV VLFLFIFAYA IKAFNFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.