Factsheet for VIT_06s0061g01470.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g06940.t01	Wine grape	cytosol	16.76	78.33
VIT_09s0002g05380.t01	Wine grape	cytosol	9.98	75.68
VIT_09s0002g05510.t01	Wine grape	cytosol	13.55	74.51
VIT_09s0002g05440.t01	Wine grape	cytosol	8.2	71.88
VIT_07s0005g02330.t01	Wine grape	cytosol	8.56	65.31
VIT_06s0080g00040.t01	Wine grape	plastid	87.43	65.14
VIT_06s0061g01480.t01	Wine grape	plastid	84.49	64.93
VIT_12s0057g00280.t01	Wine grape	cytosol	3.48	62.9
VIT_09s0018g00900.t01	Wine grape	mitochondrion	7.93	62.68
VIT_02s0012g02770.t01	Wine grape	cytosol	4.99	61.54
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	16.22	59.67
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.5	57.4
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	6.95	57.35
VIT_06s0080g00050.t01	Wine grape	plasma membrane	8.02	54.22
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	20.41	53.76
VIT_13s0074g00700.t01	Wine grape	plastid	70.41	53.38
VIT_13s0074g00660.t01	Wine grape	plastid	69.79	53.19
KRG96158	Soybean	endoplasmic reticulum	68.0	52.48
Solyc11g007290.1.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	67.38	51.53
VIT_09s0002g05470.t01	Wine grape	cytosol	11.14	46.82
VIT_09s0002g05490.t01	Wine grape	mitochondrion	53.21	46.68
VIT_09s0002g05590.t01	Wine grape	plasma membrane	59.8	46.15
VIT_09s0002g05600.t01	Wine grape	mitochondrion	59.36	45.93
VIT_09s0002g05570.t01	Wine grape	plasma membrane	59.45	45.87
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	59.63	45.85
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	58.02	45.3
VIT_04s0008g04820.t01	Wine grape	plastid	57.13	45.17
VIT_09s0002g05360.t01	Wine grape	plasma membrane	58.47	44.06
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.26	43.63
VIT_04s0043g00970.t01	Wine grape	mitochondrion	5.97	43.51
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	54.63	43.14
VIT_18s0001g10650.t01	Wine grape	mitochondrion	6.42	42.86
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	56.95	42.8
VIT_09s0002g03630.t01	Wine grape	plasma membrane	53.48	42.55
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	58.91	42.26
VIT_09s0002g03570.t01	Wine grape	plasma membrane	12.12	42.24
VIT_14s0030g00590.t01	Wine grape	cytosol	6.15	41.82
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	2.94	41.25
VIT_11s0016g04590.t01	Wine grape	cytosol	53.12	40.35
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	50.8	39.89
VIT_05s0020g00680.t01	Wine grape	plastid	51.07	39.87
VIT_09s0002g06930.t01	Wine grape	mitochondrion	9.36	39.33
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	23.89	35.12
VIT_09s0002g03580.t01	Wine grape	plasma membrane	21.3	34.64
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	19.88	34.41
VIT_07s0005g02250.t01	Wine grape	plasma membrane	9.71	32.83
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	12.66	30.41
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	4.55	28.02
VIT_09s0002g05450.t01	Wine grape	mitochondrion	4.55	21.79
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	2.76	12.6
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	1.43	7.92

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
ProteinID:CCB44175	ProteinID:CCB44175.1	UniProt:F6GW40	EMBL:FN594957	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF429
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002109CF0	ArrayExpress:VIT_06s0061g01470	EnsemblPlantsGene:VIT_06s0061g01470
EnsemblPlants:VIT_06s0061g01470.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:19330683..19339761

Molecular Weight (calculated)

126981.0 Da

IEP (calculated)

7.077

GRAVY (calculated)

0.090

Length

1122 amino acids

Sequence
(BLAST)

0001: MIGLSPSKKR VVKILQNVSG IIRSSRMTLL LGPPASGKTT FLKALSREQD DDLRITGKIT YCGHEFSEFV PQRTCAYISQ HKLHHGEMTV HETLNFSGRC
0101: LGVGTRYEML VELSRREKEV GIKSDPEIDA FMKATAMAGQ ETSLITDYVL KILGLDICAD IMVGDEMRRG ISGGQKKCVT TGEMLVGPAK AFFMDEISTG
0201: LDSSTTFQIV KFMKQMVHIL DITMVISLLQ TPPETYDLFY DIILLSEGKI VYQGPRENVL EFFEHMGFRC PDRKEVADFL QEVTSKKDQE QYWFRKNQPY
0301: RYISIPEFAR SFNSFHVGQQ ILEDIGNRNE IWSIRRCTKI LGSTVFSLIN VLQTVLSFVW CSSNGSLSLF RFLAATGRTP VVANILGSFT LLIVFVLRGY
0401: VVARVDIEPW MIWGYYASPM MYGQNAIAIN EFLDERWNNP VTNSTDSVGV TLLKQIGLFS DERWCWICVG VLFAFSLLFN ILFIAALSFL NCPDLNLVLI
0501: CLRNSQGKGM VLPFQPLSLA FNHVNYYVDM PAEMKSQWVK EDRLQLLHDV SGAFRPGILT ALVGVSGAGK TTLMDVLAGR KTGGYIEGSI SISGYPKNQA
0601: TFTRVSGYCE QHDIHSPYVT VYESLLYSAW LHLASDVKDS TRKMFVEEVM DLVELHPLRH ALVGLVGVDG LSTEQRKRLT IAVELVANPS IIFIDEPTSG
0701: LDARAAAIVM RTVRNTVDTG RTVVCTIHQP SIDIFEAFDE LLLMKRGGQV IYTGPLGHQS HMISVPGVTK IKEGYNPATW MLEVSTSAVE AQLDIDFAEV
0801: YANSALYQRN QDLIKELSTP ALVSKYLYFP TQYSQSFITQ CKACFWKQHY SYWRNSEYKA IWFFMMIAIG FIFGVIFWRK GDQIYKQEDL INLLGATYSA
0901: IIFLKTSNAF AVQPVVAVER TVFYRERAAG MYSELPNAFA QVGDKIRTSL TISKLTSGLS MCFTYFSMYG MMVTALTPDY QIADIVSSFF SNFWNLFSGF
1001: LIPRPLIPIW WRWYYWASPV AWTIYGIFAS QVGDITSEAE ITGRSPRPVN EFIKDELGLD HDFLVPVVFS HVGWVFLFFI MFAYGIKFIK FQRRNQELIN
1101: EQRTPAPGSK DLHFPTNIPN PL

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.