Factsheet for VIT_09s0002g05510.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05440.t01	Wine grape	cytosol	47.55	75.78
VIT_09s0002g06940.t01	Wine grape	cytosol	77.94	66.25
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	70.59	33.8
VIT_06s0061g01470.t01	Wine grape	mitochondrion	74.51	13.55
VIT_09s0002g05490.t01	Wine grape	mitochondrion	84.31	13.45
VIT_09s0002g05590.t01	Wine grape	plasma membrane	85.29	11.97
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	84.8	11.86
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	83.33	11.83
VIT_09s0002g05600.t01	Wine grape	mitochondrion	83.82	11.79
VIT_09s0002g05570.t01	Wine grape	plasma membrane	83.82	11.76
VIT_09s0002g05360.t01	Wine grape	plasma membrane	83.82	11.48
KRH09925	Soybean	mitochondrion	69.61	11.06
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	84.31	11.0
VIT_06s0061g01480.t01	Wine grape	plastid	77.45	10.82
VIT_04s0008g04820.t01	Wine grape	plastid	75.0	10.78
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.53	10.56
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	73.04	10.49
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.59	10.45
VIT_09s0002g03630.t01	Wine grape	plasma membrane	72.06	10.43
VIT_06s0080g00040.t01	Wine grape	plastid	76.96	10.43
VIT_13s0074g00660.t01	Wine grape	plastid	71.57	9.92
VIT_13s0074g00700.t01	Wine grape	plastid	71.57	9.86
VIT_11s0016g04590.t01	Wine grape	cytosol	71.08	9.82
KRH47215	Soybean	endoplasmic reticulum	70.59	9.72
KRH44279	Soybean	endoplasmic reticulum, mitochondrion	70.59	9.72
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	71.08	9.71
VIT_05s0020g00680.t01	Wine grape	plastid	66.67	9.46
VIT_14s0030g00590.t01	Wine grape	cytosol	4.41	5.45
VIT_04s0043g00970.t01	Wine grape	mitochondrion	3.92	5.19
VIT_06s0080g00050.t01	Wine grape	plasma membrane	3.43	4.22
VIT_18s0001g10650.t01	Wine grape	mitochondrion	2.94	3.57
VIT_12s0057g00280.t01	Wine grape	cytosol	0.98	3.23
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	1.96	2.94
VIT_07s0005g02330.t01	Wine grape	cytosol	1.96	2.72
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.98	2.5
VIT_02s0012g02770.t01	Wine grape	cytosol	0.98	2.2
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	4.9	2.14
VIT_09s0002g05450.t01	Wine grape	mitochondrion	2.45	2.14
VIT_09s0002g03570.t01	Wine grape	plasma membrane	1.47	0.93
VIT_07s0005g02250.t01	Wine grape	plasma membrane	1.47	0.9
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.49	0.55
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.98	0.26
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
TraesCS4B01G331500.1	Wheat	cytosol	0.0	0.0
OQU89275	Sorghum	cytosol	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03580.t01	Wine grape	plasma membrane	0.0	0.0
Zm00001d019960_P001	Maize	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	ProteinID:CCB59533	ProteinID:CCB59533.1
UniProt:F6HX63	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000210A4E5	ArrayExpress:VIT_09s0002g05510
EnsemblPlantsGene:VIT_09s0002g05510	EnsemblPlants:VIT_09s0002g05510.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:5242524..5243243

Molecular Weight (calculated)

22357.2 Da

IEP (calculated)

9.643

GRAVY (calculated)

-0.193

Length

204 amino acids

Sequence
(BLAST)

001: MKSQGVLEDK LELLKGVSGA SRPGVLTALM SVSGAGKTTL MDVLAGRKTG GYIEGNISIS GYPKKQETFA QISGYCEQND IHSPYVTIHE SLLYSGWLRL
101: SPDVDAKTKM MFIEEVMELV ELTPLRDALV GLPGVNSLST EQRKRLTIAV ELVANPSIIF MDEPTSGLDA RAAAIVMRTR THPPTHARTH RGSRIKTIHQ
201: HKFK

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.