Factsheet for VIT_09s0002g03550.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g02330.t01	Wine grape	cytosol	15.74	69.39
VIT_09s0002g05380.t01	Wine grape	cytosol	15.74	68.92
VIT_09s0018g00900.t01	Wine grape	mitochondrion	14.81	67.61
VIT_09s0002g05470.t01	Wine grape	cytosol	23.15	56.18
VIT_09s0002g03580.t01	Wine grape	plasma membrane	58.33	54.78
VIT_09s0002g06930.t01	Wine grape	mitochondrion	21.91	53.18
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	56.79	48.23
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	98.61	42.8
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	13.12	42.08
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	13.73	36.18
AT1G15210.1	Thale cress	plastid	74.07	33.29
Bra026157.1-P	Field mustard	plastid	73.61	32.63
CDY36535	Canola	plastid	73.46	32.6
CDY39620	Canola	plastid	73.3	32.49
TraesCS7B01G271600.1	Wheat	plasma membrane	75.31	32.3
TraesCS7D01G366600.1	Wheat	plasma membrane	75.46	32.23
TraesCS7D01G366500.1	Wheat	plasma membrane	72.53	31.56
HORVU7Hr1G088600.3	Barley	plasma membrane	72.38	31.39
VIT_09s0002g03630.t01	Wine grape	plasma membrane	63.43	29.15
TraesCS7A01G356100.3	Wheat	plasma membrane	57.72	28.86
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	20.68	28.69
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	61.11	27.14
VIT_09s0002g05600.t01	Wine grape	mitochondrion	60.65	27.1
VIT_09s0002g05590.t01	Wine grape	plasma membrane	60.34	26.89
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.33	26.49
VIT_09s0002g05570.t01	Wine grape	plasma membrane	59.41	26.48
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	58.18	26.24
VIT_13s0074g00700.t01	Wine grape	plastid	59.72	26.15
VIT_13s0074g00660.t01	Wine grape	plastid	58.95	25.95
VIT_06s0061g01480.t01	Wine grape	plastid	57.72	25.62
VIT_09s0002g05360.t01	Wine grape	plasma membrane	58.49	25.45
VIT_04s0008g04820.t01	Wine grape	plastid	55.71	25.44
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.71	25.4
VIT_05s0020g00680.t01	Wine grape	plastid	55.71	25.12
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	59.41	24.62
VIT_06s0080g00040.t01	Wine grape	plastid	57.1	24.57
VIT_11s0016g04590.t01	Wine grape	cytosol	53.86	23.63
VIT_09s0002g05490.t01	Wine grape	mitochondrion	45.99	23.3
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	51.08	23.29
VIT_06s0061g01470.t01	Wine grape	mitochondrion	34.41	19.88
VIT_09s0002g05450.t01	Wine grape	mitochondrion	3.4	9.4
VIT_04s0043g00970.t01	Wine grape	mitochondrion	1.39	5.84
VIT_14s0030g00590.t01	Wine grape	cytosol	1.23	4.85
VIT_06s0080g00050.t01	Wine grape	plasma membrane	1.08	4.22
VIT_07s0005g02250.t01	Wine grape	plasma membrane	0.31	0.6
VIT_18s0001g10650.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05510.t01	Wine grape	cytosol	0.0	0.0
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.0	0.0
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	0.0	0.0
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03570.t01	Wine grape	plasma membrane	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0002g06940.t01	Wine grape	cytosol	0.0	0.0
VIT_02s0012g02770.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABC_2_trans	InterPro:ABC_trans_N
InterPro:ABC_transporter-like	ProteinID:CCB59427	ProteinID:CCB59427.1	UniProt:F6HYA4	EMBL:FN596494	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF224
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002109FB5	ArrayExpress:VIT_09s0002g03550	EnsemblPlantsGene:VIT_09s0002g03550
EnsemblPlants:VIT_09s0002g03550.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:3229012..3242582

Molecular Weight (calculated)

73699.3 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.180

Length

648 amino acids

Sequence
(BLAST)

001: MDLERVGSGR RVSRSRSRGS WGVEDVFSAS RRSRRSNLDD DEEALRLAAL EKLPTYDRLR TSIIKSFEDN DHNNVGNRVV HKEVDVRKLD INDRQNFIDR
101: LFKVAEEDNE KFLKKFRNRI DKVGIRLPTV EVRFEHLTIE ADCYIGTRAL PTLPNAALNI AETGLGLLGI RLAKQTKLTI LKDASGIVKP SRMTLLLGPP
201: SSGKTTLLLA LAGKLDSSLK VRGEVTYNGH RLNEFVPQKT SAYISQNDVH IGEMTVKETL DFSARCQGVG PRYELLTELA RREKEAGIVP EAEVDLFMKA
301: TAMEGVEGSL ITDYTLRILG LDICQDTMVG DEMQRGISGG QKKRVTTGEM IVGPTKTLFM DEISTGLDSS TTFQIVKCLQ QIVHLTEATI LMSLLQPAPE
401: TFDLFDDIIL LSEGQIVYQG PRAHILEFFE SCGFRCPERK GTADFLQEVT SRKDQEQYWA DRSKPYRYIP VSEFANRFKS FHVGMRLEDQ LSIPYDRSQS
501: HQPALVFKKY SVPKMELLKT SFDKEWLLIK RNAFVYVFKT VQIIIVALIA STVFLRTKMH TRNESDGGLY VGALLFSMII NMFNGFYELS LTIVRLPVFY
601: KQRDLLFHPA WVYTLPTFLL RIPISIFESI VWMVITYYTI GFAPEASR

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.