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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026157.1-P Field mustard plastid 96.37 96.24
CDY39620 Canola plastid 95.14 95.01
AT1G15210.1 Thale cress plastid 89.18 90.29
VIT_09s0002g03550.t01 Wine grape cytosol, mitochondrion, peroxisome, plasma membrane 32.6 73.46
VIT_09s0002g03570.t01 Wine grape plasma membrane 15.82 71.74
CDY65846 Canola mitochondrion, plastid 13.97 68.46
TraesCS7A01G356100.3 Wheat plasma membrane 60.62 68.29
VIT_09s0002g03560.t01 Wine grape endoplasmic reticulum, golgi, plastid 19.66 67.37
TraesCS7B01G271600.1 Wheat plasma membrane 67.53 65.25
CDY55994 Canola extracellular 2.81 65.08
HORVU7Hr1G088600.3 Barley plasma membrane 66.58 65.06
TraesCS7D01G366600.1 Wheat plasma membrane 67.53 65.0
TraesCS7D01G366500.1 Wheat plasma membrane 66.1 64.81
CDY69298 Canola cytosol 7.26 53.54
CDY55993 Canola endoplasmic reticulum, extracellular 0.89 52.0
CDY08278 Canola cytosol, nucleus, plasma membrane 48.36 50.57
CDY68749 Canola cytosol 28.49 50.49
CDY69297 Canola plasma membrane 14.59 50.47
CDY58249 Canola plasma membrane 14.52 50.0
CDY58246 Canola plasma membrane 14.18 48.59
CDY63360 Canola plasma membrane 24.79 46.41
CDY68759 Canola mitochondrion 3.9 33.53
CDY07589 Canola cytoskeleton, cytosol, nucleus 3.9 31.84
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078HDX9UniProt:A0A078HDX9InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeEnsemblPlants:CDY36535ProteinID:CDY36535
ProteinID:CDY36535.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00062214001
InterPro:IPR003439InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370
PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF224SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEDB4FSEG:seg:::
Description
BnaA06g09880DBnaA06g09880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDX9]
Coordinates
chrLK032378:-:67967..73306
Molecular Weight (calculated)
164631.0 Da
IEP (calculated)
8.014
GRAVY (calculated)
0.045
Length
1460 amino acids
Sequence
(BLAST)
0001: MDYDPAHAMS RGGSMRQSIS RSVSRASRNL EDIFSPSARR TKSTNEDEEA LKWAAIEKLP TYSRLRTSLM PALGEDDIYG NQILNKEVDV TKLDGEERAR
0101: FIDVVFKVAE QDNERILTKL RNRIDRVGIT LPTVEVRYDH LTVKADCYTG DRSLPSLTNT VRNMGESLLG LVGIHLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDISGEVT YNGHRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVTISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIV EFFESFGFKC PERKGTADFL QELADTQSLN LVNPHPLRKI SLIRTRPVTS KKDQEQYWVD QTKPYRYITV
0501: PEFASKFKTF HVGTKLSNEL SVPFDKSKGH KAALVFDKYS VKKSELLKTC WDKEWMLMKR NSFFYVFKTV QIIIIAAILS TVFLRTELNT RNVADGNMYM
0601: GALLFGLIVN MFNGLAEMAM TIQRLPVFYK QRDLLFHPPW AYTLPTFLLG IPISIFETTA WMGVTYYSVG LAPEAERFFK QFLIIFLIQQ MAAGIFRFIA
0701: SICRTMTIAN TGGMLALLVV FLTGGFLLPR REIPVWWRWA FWASPLSYGF NAISVNELFA PRWMNKLSSD NTTRLGTTLL NMWDVFDDEN WYWIGIGGLF
0801: GFAVLFNGLF TLALSYLDPL GKPQAILPKE EDESKNEIPM ENVSTKKGMV LPFTPLALSF DDVKYFVDMP AEMRDQGVQE TRLQLLKGVT STFRPGVLTA
0901: LMGVSGAGKT TLMDVLAGRK TGGYIEGDIR VSGFPKKQET FARISGYCEQ TDIHSPQVTV RESLIFSAFL RLAKEVSKEE KMMFVDQVME LVELVDLKDA
1001: IVGLPGVTGL STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR AVRNTVDTGR TVVCTIHQPS IDIFEAFDEL LLMKRGGQVI YSGPLGRNSH
1101: KIVEYFEAIP GVPKIPEKYN PATWMLEASS LAAELKLGVD FAELYKSSSL CQRNKQLVQE LSVPPQGASD LYFATQFSQD TWGQYKSCLW KQWWTYWRSP
1201: DYNVVRFIFT LATALMIGSV FWQIGGKRSN VQDLTMVLGA IYSAVIFVGV NNCSTVQPMV AVERTVFYRE KAAGMYSAIP YAISQVTCEL PYVFIQTTYY
1301: SLIVYAMVGF EWKASKFFWF LFINYTSFLY WTYYGMMTVS LTPNHQVASI FASAFYGIFN LFSGFFIPRP KIPKWWIWYY WICPVAWTIY GLITSQYGDV
1401: DTPIAFPGGP PNLTVKQYLK DQYGFESDFM GPVAAVLVIF PVFFAFVFAF CIRTLNFQTR
Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)
0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
Arabidopsis Description
ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.