Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58246 | Canola | plasma membrane | 94.58 | 94.13 |
| CDY55994 | Canola | extracellular | 6.37 | 42.86 |
| CDY55993 | Canola | endoplasmic reticulum, extracellular | 2.12 | 36.0 |
| CDY08278 | Canola | cytosol, nucleus, plasma membrane | 72.64 | 22.06 |
| VIT_09s0002g06940.t01 | Wine grape | cytosol | 11.08 | 19.58 |
| TraesCS3D01G284900.1 | Wheat | plasma membrane | 48.82 | 17.97 |
| KRH05086 | Soybean | plasma membrane | 49.53 | 16.67 |
| Zm00001d019951_P001 | Maize | plasma membrane | 42.69 | 14.79 |
| CDY36535 | Canola | plastid | 50.0 | 14.52 |
| CDY39620 | Canola | plastid | 49.76 | 14.43 |
| TraesCS3A01G285100.1 | Wheat | plastid | 49.06 | 14.23 |
| HORVU3Hr1G068750.2 | Barley | plastid | 48.82 | 14.16 |
| TraesCS3B01G319000.1 | Wheat | plastid | 48.58 | 14.09 |
| CDY68749 | Canola | cytosol | 1.42 | 0.73 |
| CDY63360 | Canola | plasma membrane | 0.24 | 0.13 |
| CDY65846 | Canola | mitochondrion, plastid | 0.0 | 0.0 |
| CDY68759 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY69297 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY69298 | Canola | cytosol | 0.0 | 0.0 |
| VIT_09s0002g06930.t01 | Wine grape | mitochondrion | 0.0 | 0.0 |
| CDY07589 | Canola | cytoskeleton, cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY58249 | EnsemblPlantsGene:GSBRNA2T00023304001 | Gene3D:3.40.50.300 | GO:A0A078J5K7 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:ABC_2_trans | InterPro:P-loop_NTPase | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF437 | PFAM:PF01061 |
| ProteinID:CDY58249 | ProteinID:CDY58249.1 | SEG:seg | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EDE707 |
| UniProt:A0A078J5K7 | MapMan:24.1.3.2.2 | : | : | : | : |
Description
BnaA03g58040DBnaA03g58040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5K7]
Coordinates
chrLK033649:+:48633..50883
Molecular Weight (calculated)
48671.5 Da
IEP (calculated)
8.336
GRAVY (calculated)
0.227
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEPTTGLDA RAAAIVMRAV KNITETGRTV VCTIHQPGTD IFEAFDELVL MKNGGRIIYH GPLGQHSSNV IEYFMRIPGV PKMKENTNPA TWLLDITSRS
101: SEDKLGVDLA QIYKESSLEN NIVIEQMRGT SSETEELTSS TRYAQTGWGQ FKACLWKQHL SYWRNPSYNL TRILFMCLTS LICGVLFWQK AKKINTQQDL
201: FNVLGSMYTV VLFTGMNNCS TVLFCIATER NVFYRERFAQ MYNSWAYSLA QVLVEIPYSL VQSILCVVIL YPMVGYYFSV YKVFWSFYAV FCTLLIYNYF
301: GMLLVVITPN IHVAFTLRSG FYSMVNLFAG YVIPKPSIPK WWIWMYYLSP TSWVLNGLLT SQYGDMEKEI IAFGEKKKVS DFLEDYFGFR HDSLVLVAIV
401: LIAFPILLAS LFAFFIGKLN FQKK
101: SEDKLGVDLA QIYKESSLEN NIVIEQMRGT SSETEELTSS TRYAQTGWGQ FKACLWKQHL SYWRNPSYNL TRILFMCLTS LICGVLFWQK AKKINTQQDL
201: FNVLGSMYTV VLFTGMNNCS TVLFCIATER NVFYRERFAQ MYNSWAYSLA QVLVEIPYSL VQSILCVVIL YPMVGYYFSV YKVFWSFYAV FCTLLIYNYF
301: GMLLVVITPN IHVAFTLRSG FYSMVNLFAG YVIPKPSIPK WWIWMYYLSP TSWVLNGLLT SQYGDMEKEI IAFGEKKKVS DFLEDYFGFR HDSLVLVAIV
401: LIAFPILLAS LFAFFIGKLN FQKK
0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
Arabidopsis Description
ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.