CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13454	Soybean	cytosol	6.19	78.0
VIT_09s0002g06940.t01	Wine grape	cytosol	14.76	77.5
KRH67878	Soybean	cytosol	13.97	72.13
KRH12639	Soybean	cytosol, mitochondrion, nucleus	4.37	59.78
KRH09796	Soybean	mitochondrion	67.38	59.54
KRH23526	Soybean	endoplasmic reticulum	53.41	56.6
TraesCS3D01G284900.1	Wheat	plasma membrane	51.67	56.51
KRH67476	Soybean	endoplasmic reticulum	64.44	56.31
KRH54837	Soybean	cytosol	2.7	55.74
KRH67473	Soybean	endoplasmic reticulum	53.25	54.87
KRG96158	Soybean	endoplasmic reticulum	61.98	53.71
KRH50642	Soybean	plasma membrane	21.43	53.57
KRH03783	Soybean	cytosol, nucleus, plasma membrane	59.05	52.47
KRH56668	Soybean	cytosol, nucleus, plasma membrane	58.89	52.33
TraesCS3B01G319000.1	Wheat	plastid	58.25	50.21
TraesCS3A01G285100.1	Wheat	plastid	58.02	50.0
HORVU3Hr1G068750.2	Barley	plastid	57.94	49.93
CDY58249	Canola	plasma membrane	16.67	49.53
KRH47215	Soybean	endoplasmic reticulum	58.1	49.39
KRH44279	Soybean	endoplasmic reticulum, mitochondrion	57.94	49.26
CDY58246	Canola	plasma membrane	16.19	47.89
KRH09925	Soybean	mitochondrion	48.49	47.59
KRH02447	Soybean	mitochondrion	52.62	46.2
KRG98296	Soybean	cytosol, peroxisome, plasma membrane	54.37	46.19
Zm00001d019951_P001	Maize	plasma membrane	44.84	46.16
KRH50641	Soybean	cytosol	52.54	46.07
KRH67877	Soybean	cytosol	22.38	45.93
CDY08278	Canola	cytosol, nucleus, plasma membrane	49.44	44.63
Bra037088.1-P	Field mustard	cytosol	49.21	44.44
AT4G15215.11	Thale cress	cytosol	48.89	44.09
KRH67875	Soybean	plastid	28.25	44.06
AT4G15230.1	Thale cress	cytosol	48.49	43.64
KRH72672	Soybean	plasma membrane	9.05	41.61
VIT_09s0002g06930.t01	Wine grape	mitochondrion	8.25	38.95
KRG95761	Soybean	cytosol	11.35	38.03
KRH02372	Soybean	plastid	0.87	5.64

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EMBL:ACUP02010670	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G206100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:K7MMY1	EnsemblPlants:KRH05086	ProteinID:KRH05086
ProteinID:KRH05086.1	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF443	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000296A023	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:33612472..33622199

Molecular Weight (calculated)

142165.0 Da

IEP (calculated)

7.001

GRAVY (calculated)

0.062

Length

1260 amino acids

Sequence
(BLAST)

0001: MTLLLGPPSS GKTTLLLALA GRLGKDLKHS GRVTYNGHGL EEFVPQRTSA YVSQRDNHIG EMTVRETLAF SARCQGIGQN YEILTDLLRR EKEANIEPDP
0101: DIDAYMKAAA LEGKQTSVVI DYILKVLGLE VCADIMVGDE MIRGISGGQK KRLTTGEMLV GPIRVFFMDE ISTGLDSSTT FQIINSIQQS IHILNGTALV
0201: SLLQPAPETY ELFDDIILLT DGQIVYQGPR ENVLEFFEST GFKCPERKGV ADFLQEVTSR KDQWQYWAHK EEPYSFVTVK NFAEAFQSFH IGQQLGDELA
0301: NPFDKSKCHP YALTTKNYGV KKKELLKACA SREFLLMKRN SFVYIFKATQ LTYLAILTTT LFLRTKMSRN TLADAEAYMG ALFFTVTVAL FNGISELNMA
0401: VMKLPVFYKQ RDQLFYPSWA YSFPPWILKI PITLVEVFIW ECIAYYAIGF DPNIGRLLKQ YLVIFCINLM ASGLFRMMAA LGRNIVVANT AGTFALLAVT
0501: AFGGFVISRK DVHKWLLWGY FSSPLMYGQA AIAVNEFLGH SWRKVSPNSN ETLGVLILRS HGFFPEAYWY WIGIGALIGY AFLFNFLFTL ALQYLNPFRN
0601: YQSGLPQEKL LERNASTAEE FNQLQARKSS SDTKMEEVGE NNKATDRGKR GMVLPFQPLS LTFDEIRYSV DMPQEMKSEG ISEDRLELLK GISGAFRPGV
0701: LTALMGISGA GKTTLLDVLA GRKTSGYIEG SITISGYPKN QETFARIAGY CEQFDIHSPN VTVYESLLYS AWLRLSPKVD KATRKMFIEE VMELVELNSL
0801: REALVGLPGE TGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFDAF DELLLLKLGG EQIYDGPIGN
0901: NSSNLIQYFE AIQGIPQIKD GYNPATWMLE VTSAAKEANL KVDFTEVYKN SELHRRNKQL IQELSSPSQG SKDLYFDSQY SQSFVAQFIA CLWKQHLSYW
1001: RNTSYTAVRL LFTTMAGLLM GVIFLDVGKK SHRRKEQDVF NAMGSMYAAV TSIGVINGAS VQPIVAIERN VFYRERAAGM YSALPYALAQ VIIELPHILA
1101: QALIYGLIVY AMMGFEWTTS KVFWYLYYTY FTFLYYTFYG MMTMAITPNP HVAAILSTSF YAIWCLFSGF IIPLSRIPVW WKWYYWICPV SWTLYGLVAS
1201: QYGDDMDKLE NGQRIDEFVK SYFGFEHDFL GVVAIVVAGF SVLFALIFAF GIKVFNFQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.