CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65846	Canola	mitochondrion, plastid	29.58	80.2
KRH67877	Soybean	cytosol	58.66	77.2
KRG95761	Soybean	cytosol	25.37	54.52
KRH50642	Soybean	plasma membrane	33.04	52.98
KRH12639	Soybean	cytosol, mitochondrion, nucleus	5.94	52.17
KRG96158	Soybean	endoplasmic reticulum	74.88	41.61
KRH54837	Soybean	cytosol	3.09	40.98
KRH09925	Soybean	mitochondrion	51.73	32.55
KRH09796	Soybean	mitochondrion	55.2	31.28
PGSC0003DMT400034124	Potato	plastid	55.2	31.25
KRH67476	Soybean	endoplasmic reticulum	54.95	30.79
KRH67473	Soybean	endoplasmic reticulum	45.54	30.09
KRH47215	Soybean	endoplasmic reticulum	51.86	28.27
KRH05086	Soybean	plasma membrane	44.06	28.25
KRH44279	Soybean	endoplasmic reticulum, mitochondrion	51.73	28.21
KRH03783	Soybean	cytosol, nucleus, plasma membrane	49.26	28.07
KRH56668	Soybean	cytosol, nucleus, plasma membrane	48.89	27.86
KRH02372	Soybean	plastid	6.44	26.67
KRH02447	Soybean	mitochondrion	46.91	26.41
KRH50641	Soybean	cytosol	46.91	26.37
KRG98296	Soybean	cytosol, peroxisome, plasma membrane	47.03	25.62
KRH23526	Soybean	endoplasmic reticulum	36.63	24.89
KRH67878	Soybean	cytosol	0.62	2.05
KRH72672	Soybean	plasma membrane	0.12	0.36
KRH13454	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	UniProt:A0A0R0KTA8	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABC_2_trans	InterPro:ABC_trans_N
InterPro:ABC_transporter-like	EMBL:ACUP02002085	EnsemblPlantsGene:GLYMA_03G192600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	EnsemblPlants:KRH67875	ProteinID:KRH67875	ProteinID:KRH67875.1	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF322	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0006ED66B4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:40346188..40351827

Molecular Weight (calculated)

92464.9 Da

IEP (calculated)

9.329

GRAVY (calculated)

-0.060

Length

808 amino acids

Sequence
(BLAST)

001: MASTSVRNDL VSGKRNQRSW PSSSFRAASW SASPFTKSAG RSSGEDNEED LKWAAIERLP TLDRMRKGMM SVVLDNGKVV CCQVDVTHLK LQDKKQLLDT
101: VLKYVDDDND KFLRKLRDRT NRVGIKIPNI EVRYENLSVE GNVHVGTRAL PTLLNVTLNT FERILELFRL APSKKRKIHI LKDVSGIVKP SRMTLLLGPP
201: GAGKTTLLLA LAGKLDPDLK VSGRITYCGH ELKEFVAKKT CAYIGQHDLH YGEMTVRETL DFSGRCLGVG TRYQMLEELL RREKQAGIKP DPEIDAFMKA
301: TAIYGQKTNL QTDYVLKIIG LDICADTLVG DNMRRGISGG QRKRVTTGEM LVGPAKALFM DEISTGLDSS TTFQICKFMR QMVHIMDETM VISLLQPAPE
401: TYELFDDVIL LSEGQIVYQG QREHVLEFFE NMGFKCPPRK GVADFLQEVT SKKDQEQYWF RRDEPYRYIS VPEFAECFQS FYIGEQLATE FKVPYDKSQT
501: HRAALAKDKY GISNWELLKA CFSREWLLMR REMFVYIYRI IQLVVLSILG FTLFLRTEMS VGTVEDGMKF FGAMFFSIMN IMFNGFSEQA MLVSRLPVFY
601: KQRDFMFYPA WAFGLPIWVL RIPISLVESG IWVVFTYYTI GFAPSASRFF KQFLALFGVH QMAISLFRLV GAVGRTYVVA NILSGLTFQI VLVLGGFIVS
701: KNNIKPWLKW GYYVSPMMYG QNAIVINEFL DERWSKPNTD SRFDAPTVGK VLLKSRGFFT DDYWFWICIG ALFGFVLLFN LLCIVALTYL NAMGDSKAFH
801: HRRRRQEE

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.