CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13454	Soybean	cytosol	29.92	73.0
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	25.0	20.0
KRG96158	Soybean	endoplasmic reticulum	89.34	14.99
KRH05086	Soybean	plasma membrane	72.13	13.97
KRH23526	Soybean	endoplasmic reticulum	67.21	13.79
KRH09925	Soybean	mitochondrion	72.13	13.71
KRH67473	Soybean	endoplasmic reticulum	65.16	13.0
KRH09796	Soybean	mitochondrion	71.31	12.2
KRH03783	Soybean	cytosol, nucleus, plasma membrane	70.49	12.13
KRH56668	Soybean	cytosol, nucleus, plasma membrane	70.08	12.06
VIT_04s0008g04820.t01	Wine grape	plastid	70.08	12.05
KRH67476	Soybean	endoplasmic reticulum	68.85	11.65
KRH47215	Soybean	endoplasmic reticulum	68.85	11.34
KRH44279	Soybean	endoplasmic reticulum, mitochondrion	68.85	11.34
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	65.98	11.27
KRH02447	Soybean	mitochondrion	63.11	10.73
KRG98296	Soybean	cytosol, peroxisome, plasma membrane	64.75	10.65
KRH50641	Soybean	cytosol	62.7	10.65
KRH54837	Soybean	cytosol	2.05	8.2
KRH12639	Soybean	cytosol, mitochondrion, nucleus	2.05	5.43
KRH67875	Soybean	plastid	2.05	0.62
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.82	0.26
KRG95761	Soybean	cytosol	0.0	0.0
KRH50642	Soybean	plasma membrane	0.0	0.0
KRH67877	Soybean	cytosol	0.0	0.0
KRH72672	Soybean	plasma membrane	0.0	0.0
KRH02372	Soybean	plastid	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	EMBL:ACUP02002086	EnsemblPlantsGene:GLYMA_03G192800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:K7KFZ1	EnsemblPlants:KRH67878	ProteinID:KRH67878	ProteinID:KRH67878.1
InterPro:P-loop_NTPase	PFAM:PF00005	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI000294E9A3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:40368071..40373961

Molecular Weight (calculated)

26445.8 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.026

Length

244 amino acids

Sequence
(BLAST)

001: MAVKNSTEIA TSSNQDPSRG MLLPFQPLSL AFNHIGNYVD MPAEMRSRGI IKDRLQLLQD VSGAFRPGIL TALVGVSGAG KTTLMDVLAG RKTGGYTEGS
101: VSISGYPKNQ ATFARISGYC EQNDIHSPHV TVYESLLFSA WLRLPSDVNA QTPRMFDEVM ELVELNQISD ALVGLPGVDG LSTEQRKRLT IAVELVANPS
201: IIFMDEPTSG LDAIVAAIVM RTVRNSVDTG RTVVHNSSTK HIHF

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.