CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05380.t01	Wine grape	cytosol	26.86	68.24
KRH12639	Soybean	cytosol, mitochondrion, nucleus	13.3	54.35
KRH54837	Soybean	cytosol	7.45	45.9
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	21.01	39.11
KRH67877	Soybean	cytosol	51.86	31.76
KRH67875	Soybean	plastid	54.52	25.37
KRH02372	Soybean	plastid	12.77	24.62
KRH67473	Soybean	endoplasmic reticulum	68.35	21.01
KRH50642	Soybean	plasma membrane	26.33	19.64
KRH67476	Soybean	endoplasmic reticulum	71.81	18.72
PGSC0003DMT400034124	Potato	plastid	65.16	17.17
KRH09796	Soybean	mitochondrion	63.56	16.76
KRH09925	Soybean	mitochondrion	53.99	15.81
KRG96158	Soybean	endoplasmic reticulum	56.91	14.72
KRH44279	Soybean	endoplasmic reticulum, mitochondrion	55.32	14.04
KRH47215	Soybean	endoplasmic reticulum	55.05	13.97
KRH03783	Soybean	cytosol, nucleus, plasma membrane	51.6	13.68
KRH56668	Soybean	cytosol, nucleus, plasma membrane	51.33	13.61
KRH23526	Soybean	endoplasmic reticulum	41.76	13.2
KRH50641	Soybean	cytosol	48.94	12.8
KRH02447	Soybean	mitochondrion	48.4	12.68
OQU87144	Sorghum	plasma membrane	41.76	12.26
KRG98296	Soybean	cytosol, peroxisome, plasma membrane	48.14	12.21
KRH05086	Soybean	plasma membrane	38.03	11.35
KRH13454	Soybean	cytosol	0.0	0.0
KRH67878	Soybean	cytosol	0.0	0.0
KRH72672	Soybean	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:ACUP02012133
EnsemblPlantsGene:GLYMA_19G169300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K7MYT0	EnsemblPlants:KRG95761	ProteinID:KRG95761	ProteinID:KRG95761.1	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF456	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI00029618E3	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:43008043..43010246

Molecular Weight (calculated)

41630.3 Da

IEP (calculated)

6.605

GRAVY (calculated)

-0.144

Length

376 amino acids

Sequence
(BLAST)

001: MEGGEGIFRA GSRRGFGFGS SSLRRKSDAD PTFSNSFHSD DDEEALKWGA IQKLPTVSRL RKGLLTNPEG EASEIDIHKL WTIANAEVDN EKFLLKLRSR
101: TDRVGVDIPT IEVRFEHLNV EADVHLGGRA LPTLTNYMVN IVEGLLKSIL RSGRQNMNIL HDVSGIIKPS WMTLLFGSPS SGKTTLLLAL AGKLDPNLKF
201: NGKVTYNGHE MNEFVPQRTA AYVDILTEVC RREKEANIVP DLGIDIYMKS VATEGQNANL LTDYILRILG LEICADIVMR NAMIRGISGG QRKRVTTGEM
301: LVGPSRVLFM DEISTGLDSS TTFQIVKSIK QYVHLLKGTA VISLLQPPPE TYNLCDDVIL FSDPHIVYQG PCEHVC

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.