Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G15215.11 | Thale cress | cytosol | 88.14 | 88.33 |
| Bra037088.1-P | Field mustard | cytosol | 86.29 | 86.59 |
| CDY08278 | Canola | cytosol, nucleus, plasma membrane | 86.07 | 86.32 |
| AT4G15236.1 | Thale cress | cytosol, nucleus, plasma membrane | 70.57 | 71.08 |
| CDY58246 | Canola | plasma membrane | 20.43 | 67.14 |
| VIT_09s0002g06940.t01 | Wine grape | cytosol | 10.79 | 62.92 |
| AT2G37280.3 | Thale cress | cytosol, nucleus, plasma membrane | 56.79 | 55.13 |
| KRH05086 | Soybean | plasma membrane | 43.64 | 48.49 |
| AT1G15210.1 | Thale cress | plastid | 49.86 | 48.41 |
| TraesCS3D01G284900.1 | Wheat | plasma membrane | 39.0 | 47.4 |
| TraesCS3B01G319000.1 | Wheat | plastid | 49.36 | 47.26 |
| TraesCS3A01G285100.1 | Wheat | plastid | 49.14 | 47.06 |
| HORVU3Hr1G068750.2 | Barley | plastid | 49.07 | 46.99 |
| Zm00001d019951_P001 | Maize | plasma membrane | 36.43 | 41.67 |
| VIT_09s0002g06930.t01 | Wine grape | mitochondrion | 7.86 | 41.2 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:827187 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | ProteinID:AEE83571.1 | EMBL:AK117203 | ProteinID:ANM66937.1 | ProteinID:ANM66938.1 |
| ArrayExpress:AT4G15230 | EnsemblPlantsGene:AT4G15230 | RefSeq:AT4G15230 | TAIR:AT4G15230 | RefSeq:AT4G15230-TAIR-G | EnsemblPlants:AT4G15230.1 |
| TAIR:AT4G15230.1 | Symbol:ATPDR2 | ProteinID:CAB10301.1 | ProteinID:CAB45997.1 | ProteinID:CAB78564.1 | ProteinID:CAB78565.1 |
| ProteinID:DAA00869.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006855 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0033231 |
| GO:GO:0042626 | InterPro:IPR003439 | RefSeq:NP_001319944.1 | RefSeq:NP_001328801.1 | RefSeq:NP_193258.3 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF449 | UniProt:Q8GZ52 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI00001D96FF |
| SEG:seg | : | : | : | : | : |
Description
ABCG30ABC transporter G family member 30 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ52]
Coordinates
chr4:+:8679760..8687519
Molecular Weight (calculated)
157776.0 Da
IEP (calculated)
8.364
GRAVY (calculated)
0.077
Length
1400 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIQTGEEDEE KATSLEVEFA SGNGVDDEEE LRLQWATVER LPTFKRVTTA LLARDEVSGK GRVIDVTRLE GAERRLLIEM LVKQIEDDNL RLLRKIRKRI
0101: DKVGIELPTV EVRFNNLSVE AECQVIHGKP IPTLWNTIKG LLSEFICSKK ETKIGILKGV SGIVRPGRMT LLLGPPGCGK TTLLQALSGK FSDSVKVGGE
0201: VCYNGCSLSE FIPEKTSSYI SQNDLHIPEL SVRETLDFSA CCQGIGSRME IMKEISRMEK LQEIIPDPAV DAYMKATSVE GLKNNLQTDY ILKILGLDIC
0301: ADTRVGDATR PGISGGEKRR LTTGELVVGP ATTLFMDEIS NGLDSSTTFQ IVSCLQQLAH IAEATILISL LQPAPETFEL FDDVILMGEG KIIYHAPRAD
0401: ICRFFEEFGF KCPERKGVAD FLQEIMSKKD QEQYWCHRDK PYSYISVDSF INKFKESNLG LLLKEELSKP FNKSQTRKDG LCYKKYSLGK WEMLKACSRR
0501: EFLLMKRNSF IYLFKSALLV FNALVTMTVF LQVGATTDSL HGNYLMGSLF TALFRLLADG LPELTLTISR LGVFCKQKDL YFYPAWAYAI PSIILKIPLS
0601: VLDSFIWTLL TYYVIGYSPE VKRFFLQFLI LSTFNLSCVS MFRAIAAIFR TIIASTITGA ISILVLSLFG GFVIPKSSMP AWLGWGFWLS PLSYAEIGLT
0701: ANEFFSPRWS KVISSKTTAG EQMLDIRGLN FGRHSYWTAF GALVGFVLFF NALYVLALTY QNNPQRSRAI ISHEKYSRPI EEDFKPCPKI TSRAKTGKII
0801: LPFKPLTVTF QNVQYYIETP QGKTRQLLSD ITGALKPGVL TSLMGVSGAG KTTLLDVLSG RKTRGIIKGE IKVGGYPKVQ ETFARVSGYC EQFDIHSPNI
0901: TVEESLKYSA WLRLPYNIDS KTKNELVKEV LETVELDDIK DSVVGLPGIS GLSIEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVAET
1001: GRTVVCTIHQ PSIDIFETFD ELILMKNGGQ LVYYGPPGQN SSKVIEYFES FSGLPKIQKN CNPATWILDI TSKSAEEKLG IDFSQSYKDS TLYKQNKMVV
1101: EQLSSASLGS EALRFPSQFS QTAWVQLKAC LWKQHYSYWR NPSHNITRIV FILLDSTLCG LLFWQKAEDI NNQQDLISIF GSMYTLVVFP GMNNCAAVIN
1201: FIAAERNVFY RERFARMYSS WAYSFSQVLI EVPYSLLQSL LCTIIVYPTI GYHMSVYKMF WSLYSIFCSL LIFNYSGMLM VALTPNIHMA VTLRSSFFSM
1301: LNLFAGFVIP KQKIPKWWIW MYYLSPTSWV LEGLLSSQYG DVDKEILVFG EKKRVSAFLE DYFGYKHESL AVVAFVLIAY PIIVATLFAF FMSKLSFQKK
0101: DKVGIELPTV EVRFNNLSVE AECQVIHGKP IPTLWNTIKG LLSEFICSKK ETKIGILKGV SGIVRPGRMT LLLGPPGCGK TTLLQALSGK FSDSVKVGGE
0201: VCYNGCSLSE FIPEKTSSYI SQNDLHIPEL SVRETLDFSA CCQGIGSRME IMKEISRMEK LQEIIPDPAV DAYMKATSVE GLKNNLQTDY ILKILGLDIC
0301: ADTRVGDATR PGISGGEKRR LTTGELVVGP ATTLFMDEIS NGLDSSTTFQ IVSCLQQLAH IAEATILISL LQPAPETFEL FDDVILMGEG KIIYHAPRAD
0401: ICRFFEEFGF KCPERKGVAD FLQEIMSKKD QEQYWCHRDK PYSYISVDSF INKFKESNLG LLLKEELSKP FNKSQTRKDG LCYKKYSLGK WEMLKACSRR
0501: EFLLMKRNSF IYLFKSALLV FNALVTMTVF LQVGATTDSL HGNYLMGSLF TALFRLLADG LPELTLTISR LGVFCKQKDL YFYPAWAYAI PSIILKIPLS
0601: VLDSFIWTLL TYYVIGYSPE VKRFFLQFLI LSTFNLSCVS MFRAIAAIFR TIIASTITGA ISILVLSLFG GFVIPKSSMP AWLGWGFWLS PLSYAEIGLT
0701: ANEFFSPRWS KVISSKTTAG EQMLDIRGLN FGRHSYWTAF GALVGFVLFF NALYVLALTY QNNPQRSRAI ISHEKYSRPI EEDFKPCPKI TSRAKTGKII
0801: LPFKPLTVTF QNVQYYIETP QGKTRQLLSD ITGALKPGVL TSLMGVSGAG KTTLLDVLSG RKTRGIIKGE IKVGGYPKVQ ETFARVSGYC EQFDIHSPNI
0901: TVEESLKYSA WLRLPYNIDS KTKNELVKEV LETVELDDIK DSVVGLPGIS GLSIEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVAET
1001: GRTVVCTIHQ PSIDIFETFD ELILMKNGGQ LVYYGPPGQN SSKVIEYFES FSGLPKIQKN CNPATWILDI TSKSAEEKLG IDFSQSYKDS TLYKQNKMVV
1101: EQLSSASLGS EALRFPSQFS QTAWVQLKAC LWKQHYSYWR NPSHNITRIV FILLDSTLCG LLFWQKAEDI NNQQDLISIF GSMYTLVVFP GMNNCAAVIN
1201: FIAAERNVFY RERFARMYSS WAYSFSQVLI EVPYSLLQSL LCTIIVYPTI GYHMSVYKMF WSLYSIFCSL LIFNYSGMLM VALTPNIHMA VTLRSSFFSM
1301: LNLFAGFVIP KQKIPKWWIW MYYLSPTSWV LEGLLSSQYG DVDKEILVFG EKKRVSAFLE DYFGYKHESL AVVAFVLIAY PIIVATLFAF FMSKLSFQKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.