Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69298 | Canola | cytosol | 23.06 | 95.96 |
| CDY69297 | Canola | plasma membrane | 48.42 | 94.55 |
| CDY63360 | Canola | plasma membrane | 83.37 | 88.08 |
| KRH50642 | Soybean | plasma membrane | 38.35 | 62.7 |
| CDY65846 | Canola | mitochondrion, plastid | 21.36 | 59.06 |
| TraesCS7A01G085800.1 | Wheat | cytosol | 25.0 | 54.93 |
| Zm00001d015022_P001 | Maize | plastid | 12.14 | 50.25 |
| AT4G15236.1 | Thale cress | cytosol, nucleus, plasma membrane | 82.28 | 48.78 |
| Zm00001d034566_P001 | Maize | cytosol | 13.23 | 45.23 |
| Zm00001d009216_P001 | Maize | cytosol | 15.66 | 45.1 |
| CDY08278 | Canola | cytosol, nucleus, plasma membrane | 69.42 | 40.97 |
| Zm00001d004097_P001 | Maize | cytosol | 15.53 | 40.51 |
| VIT_07s0005g02240.t01 | Wine grape | cytosol, golgi, mitochondrion, nucleus | 18.45 | 32.55 |
| TraesCS5D01G163600.1 | Wheat | plasma membrane | 53.52 | 30.65 |
| OQU78699 | Sorghum | cytosol, nucleus, plasma membrane | 55.34 | 30.65 |
| TraesCS5B01G155500.3 | Wheat | plasma membrane | 54.61 | 30.06 |
| TraesCS7D01G080300.1 | Wheat | cytosol, nucleus, plasma membrane | 51.09 | 30.05 |
| KXG22958 | Sorghum | cytosol, nucleus, plasma membrane | 54.85 | 29.74 |
| TraesCS5B01G155600.1 | Wheat | plasma membrane | 50.12 | 29.65 |
| CDY39620 | Canola | plastid | 50.73 | 28.59 |
| CDY36535 | Canola | plastid | 50.49 | 28.49 |
| OQU91495 | Sorghum | cytosol, nucleus, plasma membrane | 41.99 | 28.13 |
| Os01t0724400-00 | Rice | cytosol | 5.83 | 27.59 |
| CDY07589 | Canola | cytoskeleton, cytosol, nucleus | 5.7 | 26.26 |
| CDY68759 | Canola | mitochondrion | 2.79 | 13.53 |
| CDY55994 | Canola | extracellular | 0.12 | 1.59 |
| CDY58249 | Canola | plasma membrane | 0.73 | 1.42 |
| CDY58246 | Canola | plasma membrane | 0.73 | 1.41 |
| CDY55993 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078JPM2 | UniProt:A0A078JPM2 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDY68749 | ProteinID:CDY68749 | ProteinID:CDY68749.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00077582001 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF449 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EE1480 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng60360DBnaCnng60360D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JPM2]
Coordinates
chrLK037892:-:1..3764
Molecular Weight (calculated)
92452.0 Da
IEP (calculated)
8.565
GRAVY (calculated)
0.007
Length
824 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSKLEDLD RHLFIDELIR HVEDDNLRLL QKIKNRIDEV GLELPTIEVR FSDLFVEAEC EVVYGKPIPT LWNAIASRIS RVICLKKEKN ISILNGVSGI
101: VRPKRMTLLL GPPSCGKTTL LLALAGRLDH SLKTTGDVSY NGHLLSEFVP EKTSNYVSQN DLHIPDITVR ETLDFSGCFQ GTGSRLETMK EISRREKLKG
201: IVPDPDIDAY MKAASIEGSK TNLQTDYILK ILGLSLCADT RVGDTSRPGI SGGQKRRLTT GETIVGPIKT LFMDEISNGL DSSTTFQIVS CLRHYALLSE
301: GTIMVSLLQP APETFELFDD VILMGEGKII YIGPRDHICR FFEDCGFKCP TRKSVAEFLQ EVISRKDQEQ YWCHIDKPYS YVSIDSFIER FKKSELGLQQ
401: QEELSKTLEK SQAQKDALCS RKYSLSNWEM LKACSRREFL LMKRNSFVYV FKSGLLICIG SITMTVYLRT GSKRDLVHAN YLMGSLFFSI FKMLADGLPE
501: LTLTISRLSV FYKQKELYFY PAWAYALPSA ILKIPISFLE AFLWTSLTYY VIGYSPDIGR FFRQFLIFFA LHLSCISMFR AIAATFRDFV LATTVGTVSV
601: LLLSLFGGFV LRKPSMPAWL QWGFWLSPLS YAEIGLTTNE FFSTRWSQAT SGNRTLGEEV LDARGLNFGD QSYWSVFGAL IGFAFFFNIV FVLALTFLKT
701: SNRSRAIVSG DDNTQSSGNH TKSSSKVASQ SKNALPFKSL TFTFQDVCYF VQTPQGKKVQ LLSNVTGAFK PGVLTALMGV SGAGKTTLMD VLSGRKSHGD
801: IEGEIQVGGY RKVQETFARV SGYC
101: VRPKRMTLLL GPPSCGKTTL LLALAGRLDH SLKTTGDVSY NGHLLSEFVP EKTSNYVSQN DLHIPDITVR ETLDFSGCFQ GTGSRLETMK EISRREKLKG
201: IVPDPDIDAY MKAASIEGSK TNLQTDYILK ILGLSLCADT RVGDTSRPGI SGGQKRRLTT GETIVGPIKT LFMDEISNGL DSSTTFQIVS CLRHYALLSE
301: GTIMVSLLQP APETFELFDD VILMGEGKII YIGPRDHICR FFEDCGFKCP TRKSVAEFLQ EVISRKDQEQ YWCHIDKPYS YVSIDSFIER FKKSELGLQQ
401: QEELSKTLEK SQAQKDALCS RKYSLSNWEM LKACSRREFL LMKRNSFVYV FKSGLLICIG SITMTVYLRT GSKRDLVHAN YLMGSLFFSI FKMLADGLPE
501: LTLTISRLSV FYKQKELYFY PAWAYALPSA ILKIPISFLE AFLWTSLTYY VIGYSPDIGR FFRQFLIFFA LHLSCISMFR AIAATFRDFV LATTVGTVSV
601: LLLSLFGGFV LRKPSMPAWL QWGFWLSPLS YAEIGLTTNE FFSTRWSQAT SGNRTLGEEV LDARGLNFGD QSYWSVFGAL IGFAFFFNIV FVLALTFLKT
701: SNRSRAIVSG DDNTQSSGNH TKSSSKVASQ SKNALPFKSL TFTFQDVCYF VQTPQGKKVQ LLSNVTGAFK PGVLTALMGV SGAGKTTLMD VLSGRKSHGD
801: IEGEIQVGGY RKVQETFARV SGYC
0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
Arabidopsis Description
ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.