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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22958 Sorghum cytosol, nucleus, plasma membrane 87.84 85.99
TraesCS5B01G155600.1 Wheat plasma membrane 72.31 77.24
TraesCS5D01G163600.1 Wheat plasma membrane 74.33 76.86
TraesCS5B01G155500.3 Wheat plasma membrane 75.54 75.08
KRH50642 Soybean plasma membrane 20.97 61.9
TraesCS7A01G085800.1 Wheat cytosol 14.92 59.2
OQU87146 Sorghum cytosol, plasma membrane 23.05 58.43
Bra005207.1-P Field mustard cytosol 55.17 57.7
AT2G37280.3 Thale cress cytosol, nucleus, plasma membrane 55.58 57.35
AT4G15236.1 Thale cress cytosol, nucleus, plasma membrane 53.09 56.83
Zm00001d015022_P001 Maize plastid 7.53 56.28
CDY69298 Canola cytosol 7.46 56.06
CDY68749 Canola cytosol 30.65 55.34
OQU91495 Sorghum cytosol, nucleus, plasma membrane 45.43 54.96
CDY69297 Canola plasma membrane 15.19 53.55
OQU87144 Sorghum plasma membrane 45.03 52.3
KXG35386 Sorghum cytosol 6.72 51.81
CDY63360 Canola plasma membrane 27.02 51.54
EES04730 Sorghum mitochondrion 49.26 50.9
KXG32868 Sorghum plasma membrane 49.19 50.38
OQU85489 Sorghum cytosol, peroxisome, plasma membrane 45.7 49.56
Zm00001d009216_P001 Maize cytosol 9.27 48.25
Zm00001d034566_P001 Maize cytosol 7.8 48.13
Zm00001d004097_P001 Maize cytosol 9.48 44.62
OQU89275 Sorghum cytosol 5.17 38.69
VIT_07s0005g02240.t01 Wine grape cytosol, golgi, mitochondrion, nucleus 12.03 38.33
EER93921 Sorghum cytosol 4.17 32.98
OQU79331 Sorghum plasma membrane 17.81 21.2
OQU79332 Sorghum plastid 3.36 16.03
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A1Z5R565InterPro:AAA+_ATPaseInterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
InterPro:IPR003439EnsemblPlants:OQU78699ProteinID:OQU78699ProteinID:OQU78699.1InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF259SMART:SM00382EnsemblPlantsGene:SORBI_3008G033700SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B8BA026
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr8:+:3072582..3084388
Molecular Weight (calculated)
168292.0 Da
IEP (calculated)
6.980
GRAVY (calculated)
0.018
Length
1488 amino acids
Sequence
(BLAST)
0001: MDHQDAGDGE ERQQQLDDRE DEQDHVLLSP PEEDGNQEPL EIDKESVVQQ QQQQQQLPLS LSSSWRAAAV SFRESLSRSV SFSLNNEQEK DDEVELRWAA
0101: VERLPTMDRL HTSLQLHAEE QQVVDVRRLG AAERRMVVDT LIANIHRDNL RLLRKQRQRM DRVGVRPPTV EVRWRDVQVE ADCQVVHGKP LPTIWNTIVS
0201: NLSLVSTMVG LNNGQQARVR ILHGVSGVVK PSRLTLLLGP PGCGKTTLLK ALAGKLNATG LKVTGEVEYN GVELSSFVPE KTAAYIDQYD LHVPEMTVRE
0301: TIDFSARFQG VGNRAEIMKE VIRKEKEAGI TPDPDVDTYM KAISVEGLER SMQTDYIMKI MGLDVCADIM VGDAMRRGIS GGEKKRLTTG EMIVGPSKAL
0401: FMDEISTGLD SSTTFQIVSS LQQLAHISES TILVSLLQPA PETYELFDDI ILMAEGKIVY HGSKSCIMSF FESCGFKCPD RKGSADFLQE VLSEKDQQQY
0501: WSRGGEAYNF FTIDQFCDKF KVSQIGQNLD GEISKPYDKS KGHKNALSYS IYSLSKWELL KACFARELLL MKRNAFIYIT KIVQLALLAA IVGTVFLRTH
0601: MGVDRVLGNY YMGSLFFALL LLMVNGFPEL SMAVIRLPVF YKQRDYYFYP AWAYAIPAFV LKVPISLVES IAWTSLSYFL IGYTPEASRF LYHLLILFLI
0701: HTGALSMFRC VASYCQTMVA SVVGGTTILV PILLFGGFLI PRPSMPNWLK WGFWLSPLSY AEIGLTKNEF LAPRWTKFTV SGMTLGRRIL MDRGFNFSSY
0801: FYWISIGALI GFIFLFNIGF AAGLTIKKPP GTSRAIISHD NVTKLNKREQ RIFMDTEDGI DKPQENSSTP SRTGRVVLPF VPLTISFQDV NYYVDTPTEM
0901: RDQGYRERKL QLLHNITGAF QPGVLSALMG VTGAGKTTLL DVLAGRKTGG VVEGDIRVGG YPKVQQTFAR ISGYCEQIDI HSPQITVGES IAYSAWLRLP
1001: TEIDSKTRDE FVNQVLETIE LDKIRDALVG IPGINGLSTE QRKRLTIAVE LVSNPSIIFM DEPTSGLDAR AAAIVMRAVK NIADTGRTVV CTIHQPSIEI
1101: FEAFDELMLM KRGGQLIYAG PLGHHSCMLI QYFQAVPGVP KIKDNYNPST WMLEVTSTSV EAQLGVDFAQ VYKESSMYKD KDEIVRLLSI PPLGTSNLHF
1201: PTQYPQKFWE QFKACIWKQC LSYWRTPSYN LVRILFITFT CIAFGALYWQ QGDINRINDE QGLFNILGCM FGTTIFVGIN NCQSVMPFVS IERSVVYRER
1301: FAGMYSPWAY SFAQVIMEIP YVLVQIVFFM LVAYPMIGYA LEAAKFFWLI YTMFCTLLYF VYFGMMMVSL TPNIQVASIL TSLFYTIQNL MSGYTVPGPK
1401: IPKWWLWLYY TSPMSWTLNL FFTTQFGYED HKKIEVFGET KSVAAFLRDY FGFRRELLPI TAVVLVAFPI FFATLFGYSI SKLNFQRR
Best Arabidopsis Sequence Match ( AT3G53480.1 )
(BLAST)
0001: MAHMVGADDI ESLRVELAEI GRSIRSSFRR HTSSFRSSSS IYEVENDGDV NDHDAEYALQ WAEIERLPTV KRMRSTLLDD GDESMTEKGR RVVDVTKLGA
0101: VERHLMIEKL IKHIENDNLK LLKKIRRRID RVGMELPTIE VRYESLKVVA ECEVVEGKAL PTLWNTAKRV LSELVKLTGA KTHEAKINII NDVNGIIKPG
0201: RLTLLLGPPS CGKTTLLKAL SGNLENNLKC SGEISYNGHR LDEFVPQKTS AYISQYDLHI AEMTVRETVD FSARCQGVGS RTDIMMEVSK REKEKGIIPD
0301: TEVDAYMKAI SVEGLQRSLQ TDYILKILGL DICAEILIGD VMRRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ FAHISSATVL
0401: VSLLQPAPES YDLFDDIMLM AKGRIVYHGP RGEVLNFFED CGFRCPERKG VADFLQEVIS KKDQAQYWWH EDLPYSFVSV EMLSKKFKDL SIGKKIEDTL
0501: SKPYDRSKSH KDALSFSVYS LPNWELFIAC ISREYLLMKR NYFVYIFKTA QLVMAAFITM TVFIRTRMGI DIIHGNSYMS ALFFALIILL VDGFPELSMT
0601: AQRLAVFYKQ KQLCFYPAWA YAIPATVLKV PLSFFESLVW TCLSYYVIGY TPEASRFFKQ FILLFAVHFT SISMFRCLAA IFQTVVASIT AGSFGILFTF
0701: VFAGFVIPPP SMPAWLKWGF WANPLSYGEI GLSVNEFLAP RWNQMQPNNF TLGRTILQTR GMDYNGYMYW VSLCALLGFT VLFNIIFTLA LTFLKSPTSS
0801: RAMISQDKLS ELQGTEKSTE DSSVRKKTTD SPVKTEEEDK MVLPFKPLTV TFQDLNYFVD MPVEMRDQGY DQKKLQLLSD ITGAFRPGIL TALMGVSGAG
0901: KTTLLDVLAG RKTSGYIEGD IRISGFPKVQ ETFARVSGYC EQTDIHSPNI TVEESVIYSA WLRLAPEIDA TTKTKFVKQV LETIELDEIK DSLVGVTGVS
1001: GLSTEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVADT GRTIVCTIHQ PSIDIFEAFD ELVLLKRGGR MIYTGPLGQH SRHIIEYFES
1101: VPEIPKIKDN HNPATWMLDV SSQSVEIELG VDFAKIYHDS ALYKRNSELV KQLSQPDSGS SDIQFKRTFA QSWWGQFKSI LWKMNLSYWR SPSYNLMRMM
1201: HTLVSSLIFG ALFWKQGQNL DTQQSMFTVF GAIYGLVLFL GINNCASALQ YFETERNVMY RERFAGMYSA TAYALGQVVT EIPYIFIQAA EFVIVTYPMI
1301: GFYPSAYKVF WSLYSMFCSL LTFNYLAMFL VSITPNFMVA AILQSLFYVG FNLFSGFLIP QTQVPGWWIW LYYLTPTSWT LNGFISSQYG DIHEEINVFG
1401: QSTTVARFLK DYFGFHHDLL AVTAVVQIAF PIALASMFAF FVGKLNFQRR
Arabidopsis Description
ABCG37ABC transporter G family member 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFH0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.