Factsheet for VIT_09s0002g03560.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum, plastid

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 2
plastid 2
extracellular 1
endoplasmic reticulum 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05440.t01	Wine grape	cytosol	21.83	72.66
VIT_09s0002g06940.t01	Wine grape	cytosol	40.14	71.25
VIT_09s0002g05510.t01	Wine grape	cytosol	33.8	70.59
VIT_12s0057g00280.t01	Wine grape	cytosol	7.98	54.84
VIT_02s0012g02770.t01	Wine grape	cytosol	7.75	36.26
VIT_14s0030g00590.t01	Wine grape	cytosol	10.8	27.88
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	95.54	27.26
VIT_04s0043g00970.t01	Wine grape	mitochondrion	9.39	25.97
TraesCS7A01G356100.3	Wheat	plasma membrane	71.13	23.38
VIT_18s0001g10650.t01	Wine grape	mitochondrion	8.92	22.62
VIT_09s0002g03630.t01	Wine grape	plasma membrane	70.19	21.21
VIT_06s0061g01470.t01	Wine grape	mitochondrion	53.76	20.41
TraesCS7B01G271600.1	Wheat	plasma membrane	71.6	20.19
TraesCS7D01G366600.1	Wheat	plasma membrane	71.36	20.04
HORVU7Hr1G088600.3	Barley	plasma membrane	69.72	19.88
VIT_09s0002g05490.t01	Wine grape	mitochondrion	59.15	19.7
CDY36535	Canola	plastid	67.37	19.66
TraesCS7D01G366500.1	Wheat	plasma membrane	68.54	19.61
Bra026157.1-P	Field mustard	plastid	66.9	19.49
AT1G15210.1	Thale cress	plastid	65.73	19.42
CDY39620	Canola	plastid	66.2	19.29
VIT_09s0002g05600.t01	Wine grape	mitochondrion	60.33	17.72
VIT_09s0002g05590.t01	Wine grape	plasma membrane	60.33	17.68
VIT_04s0008g04820.t01	Wine grape	plastid	58.69	17.62
VIT_09s0002g05570.t01	Wine grape	plasma membrane	60.09	17.61
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	59.39	17.61
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.81	17.56
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	60.09	17.55
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	57.04	17.1
VIT_09s0002g05360.t01	Wine grape	plasma membrane	58.92	16.86
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.1	16.82
VIT_13s0074g00700.t01	Wine grape	plastid	57.98	16.69
VIT_13s0074g00660.t01	Wine grape	plastid	57.51	16.64
VIT_06s0061g01480.t01	Wine grape	plastid	56.81	16.58
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	59.15	16.11
VIT_06s0080g00040.t01	Wine grape	plastid	56.81	16.07
VIT_05s0020g00680.t01	Wine grape	plastid	52.11	15.45
VIT_11s0016g04590.t01	Wine grape	cytosol	51.41	14.83
VIT_07s0005g02250.t01	Wine grape	plasma membrane	7.28	9.34
VIT_09s0002g05450.t01	Wine grape	mitochondrion	1.88	3.42
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	3.29	3.0
VIT_07s0005g02330.t01	Wine grape	cytosol	0.94	2.72
VIT_06s0080g00050.t01	Wine grape	plasma membrane	0.94	2.41
VIT_09s0002g03580.t01	Wine grape	plasma membrane	3.29	2.03
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	3.29	1.83
VIT_09s0002g03570.t01	Wine grape	plasma membrane	1.17	1.55
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.47	1.1
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_transporter-like	ProteinID:CCB59428
ProteinID:CCB59428.1	UniProt:F6HYA5	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF08370
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002109FB6	ArrayExpress:VIT_09s0002g03560	EnsemblPlantsGene:VIT_09s0002g03560	EnsemblPlants:VIT_09s0002g03560.t01	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:3242583..3244574

Molecular Weight (calculated)

47334.0 Da

IEP (calculated)

7.555

GRAVY (calculated)

-0.268

Length

426 amino acids

Sequence
(BLAST)

001: MNKRASDNST RLGDSVLDAF DVFHDKNWFW IGAAALLGFA ILFNVLFTFS LMYLNPFGNR QAIMSEETAT EIEAEQEESK EEPRLRRNST KRDSIPRSLS
101: SSGGNNSREM AIRRMNSRLS SLSNGNGMSR SGNESLEAAN GVAPKRGMIL PFTPLAMSFD DVNYYVDMPP EMKEQGVTED RLQLLRDVTG AFRPGVLTAL
201: MGVSGAGKTT LMDVLAGRKT GGYIEGDIRI SGFPKKQETF ARISGYCEQN DIHSPQVTVR ESLIFSAFLR LPKEVSKEEK MIFVDEVMEL VELDNLKDAI
301: VGLPGITGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFNELL LMKRGGQVIY SGPLGRNSHK
401: IIEYFEAIPK SRKLKKSITQ QHGCWK

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.