Factsheet for VIT_07s0005g02250.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	38.25	69.78
VIT_12s0057g00280.t01	Wine grape	cytosol	9.94	53.23
VIT_02s0012g02770.t01	Wine grape	cytosol	13.86	50.55
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	9.64	40.0
VIT_04s0043g00970.t01	Wine grape	mitochondrion	13.86	29.87
VIT_09s0002g03570.t01	Wine grape	plasma membrane	28.61	29.5
VIT_14s0030g00590.t01	Wine grape	cytosol	13.25	26.67
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	10.54	25.74
VIT_18s0001g10650.t01	Wine grape	mitochondrion	12.95	25.6
VIT_06s0080g00050.t01	Wine grape	plasma membrane	12.05	24.1
VIT_05s0020g00680.t01	Wine grape	plastid	58.73	13.57
VIT_09s0002g05490.t01	Wine grape	mitochondrion	44.28	11.49
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.67	10.52
VIT_09s0002g05600.t01	Wine grape	mitochondrion	44.58	10.21
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	43.07	10.06
VIT_09s0002g05570.t01	Wine grape	plasma membrane	43.98	10.04
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	43.37	10.02
VIT_09s0002g05590.t01	Wine grape	plasma membrane	43.67	9.97
VIT_09s0002g03630.t01	Wine grape	plasma membrane	42.17	9.93
VIT_09s0002g05360.t01	Wine grape	plasma membrane	44.28	9.87
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	43.37	9.87
VIT_13s0074g00660.t01	Wine grape	plastid	43.37	9.78
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.87	9.78
VIT_06s0061g01470.t01	Wine grape	mitochondrion	32.83	9.71
VIT_04s0008g04820.t01	Wine grape	plastid	40.96	9.58
VIT_13s0074g00700.t01	Wine grape	plastid	42.17	9.46
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	42.47	9.44
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	43.98	9.34
VIT_06s0061g01480.t01	Wine grape	plastid	40.96	9.32
VIT_09s0002g06940.t01	Wine grape	cytosol	6.33	8.75
VIT_11s0016g04590.t01	Wine grape	cytosol	38.55	8.67
VIT_06s0080g00040.t01	Wine grape	plastid	38.25	8.43
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	9.34	7.28
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	5.72	4.07
VIT_09s0002g05450.t01	Wine grape	mitochondrion	1.81	2.56
VIT_09s0002g05510.t01	Wine grape	cytosol	0.9	1.47
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.6	0.99
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.6	0.81
VIT_09s0002g05440.t01	Wine grape	cytosol	0.3	0.78
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.3	0.7
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	1.51	0.66
VIT_09s0002g03580.t01	Wine grape	plasma membrane	1.2	0.58
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.3	0.37
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.6	0.31
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0
VIT_07s0005g02330.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	InterPro:ABC_2_trans	ProteinID:CBI37020	ProteinID:CBI37020.3	UniProt:D7U2Q4	EMBL:FN596502
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626
GO:GO:0055085	PFAM:PF01061	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	TMHMM:TMhelix	UniParc:UPI0001BE4746
ArrayExpress:VIT_07s0005g02250	EnsemblPlantsGene:VIT_07s0005g02250	EnsemblPlants:VIT_07s0005g02250.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:4622799..4627018

Molecular Weight (calculated)

38218.9 Da

IEP (calculated)

7.729

GRAVY (calculated)

0.362

Length

332 amino acids

Sequence
(BLAST)

001: MLLIQCEQSY TPSIDIFETF NELILMKRGG RIIYAGELGK HSSKLIQYFE EIPGVPKFNA NRNPATWMLE VTGPSAEAQL GSDFAYLYNN DAYCFLCGEN
101: KELVRRLSLP TPALLWQKGQ KIDGEQELFN IIGPIFILIQ FLGIHNCTAI QPFIFTERTV TIEIPYILLQ SLLFVTITYP AINFYWSAYK MIWYFYSMFC
201: TLLYFNYFGM LAVSLSPTFE VASVLTSLCF TLMDLFTGFI IPGPQIPKWR VWSYWICPMV WSLKALVTSQ YGDIKKEISV FGEPKSISAF LKSYYGYHHE
301: KLGVAAFVLF SLPLVFALAF AFFIAKLNFQ RR

Best Arabidopsis Sequence Match ( AT4G15215.1 )
(BLAST)

0001: MAQTGEDVDK AKSFQVEFAC GNGVDDEEKL RSQWATVERL PTFKRVTTAL LHTGDDSSDI IDVTKLEDAE RRLLIEKLVK QIEADNLRLL RKIRKRIDEV
0101: GIELPTVEVR FNDLSVEAEC QVVHGKPIPT LWNTIKGSLS KFVCSKKETK IGILKGVSGI VRPGRMTLLL GPPGCGKTTL LQALSGRLSH SVKVGGKVSY
0201: NGCLLSEFIP EKTSSYISQN DLHIPELSVR ETLDFSACCQ GIGSRMEIMK EISRREKLKE IVPDPDIDAY MKAISVEGLK NSMQTDYILK ILGLDICADT
0301: RAGDATRPGI SGGQKRRLTT ATTLLMDEIS NGLDSSTTFQ IVSCLQQLAH IAGATILISL LQPAPETFEL FDDVILLGEG KIIYHAPRAD ICKFFEGCGF
0401: KCPERKGVAD FLQEVMSRKD QEQYWCHRSK PYSYISVDSF IKKFNESNLG FLLKEELSKP FDKSQTRKDS LCFRKYSLSK WEMLKACSRR EILLMKRNSF
0501: IYLFKSGLLV FNALVTMTVF LQAGATRDAR HGNYLMGSMF TALFRLLADG LPELTLTISR LGVFCKQKDL YFYPAWAYAI PSIILRIPLS VLDSFIWTVL
0601: TYYVIGYSPE VGRFFRHFII LLTFHLSCIS MFRAIASICR TFVACSITGA ISVLLLALFG GFVIPKSSMP TWLGWGFWLS PLSYAEIGLT ANEFFSPRWR
0701: KLTSGNITAG EQVLDVRGLN FGRHSYWTAF GALVGFVLFF NALYTLALTY RNNPQRSRAI VSHGKNSQCS EEDFKPCPEI TSRAKTGKVI LPFKPLTVTF
0801: QNVQYYIETP QGKTRQLLFD ITGALKPGVL TSLMGVSGAG KTTLLDVLSG RKTRGIIKGE IRVGGYPKVQ ETFARVSGYC EQFDIHSPNI TVEESLKYSA
0901: WLRLPYNIDA KTKNELVKEV LETVELEDIK DSMVGLPGIS GLSTEQRKRL TIAVELVSNP SIIFLDEPTT GLDARAAAIV MRAVKNVAET GRTVVCTIHQ
1001: PSIDIFETFD ELILMKDGGQ LVYYGPLGKH SSKVIKYFES IPGVPKVQKN CNPATWMLDI TCKSAEHRLG MDFAQAYKDS TLYKENKMVV EQLSSASLGS
1101: EALSFPSRYS QTGWGQLKAC LWKQHCSYWR NPSHNLTRIV FILLNSLLCS LLFWQKAKDI NNQQDLFSIF GSMYTIVIFS GINNCATVMN FIATERNVFY
1201: RERFARMYSS WAYSFSQVLV EVPYSLLQSL LCTIIVYPMI GYHMSVYKMF WSLYSIFCSL LIFNYCGMLM VALTPNIHMA LTLRSTFFSM VNLFAGFVMP
1301: KQKIPKWWIW MYYLSPTSWV LEGLLSSQYG DVEKEITVFG EKKSVSAFLE DYFGYKHDSL AVVAFVLIAF PIIVASLFAF FMSKLNFQKK

Arabidopsis Description

ABCG41ABC transporter G family member 41 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.