Factsheet for VIT_13s0074g00660.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	89.4	95.5
VIT_13s0074g00700.t01	Wine grape	plastid	94.23	93.72
VIT_06s0061g01480.t01	Wine grape	plastid	75.27	75.89
VIT_09s0002g06940.t01	Wine grape	cytosol	12.09	74.17
VIT_09s0002g05380.t01	Wine grape	cytosol	7.4	73.65
VIT_09s0002g05440.t01	Wine grape	cytosol	6.32	72.66
VIT_06s0080g00040.t01	Wine grape	plastid	73.98	72.31
VIT_09s0002g05510.t01	Wine grape	cytosol	9.92	71.57
VIT_06s0061g01470.t01	Wine grape	mitochondrion	53.19	69.79
VIT_09s0018g00900.t01	Wine grape	mitochondrion	6.45	66.9
VIT_07s0005g02330.t01	Wine grape	cytosol	6.52	65.31
VIT_12s0057g00280.t01	Wine grape	cytosol	2.65	62.9
VIT_02s0012g02770.t01	Wine grape	cytosol	3.87	62.64
VIT_09s0002g05490.t01	Wine grape	mitochondrion	53.46	61.53
VIT_09s0002g05590.t01	Wine grape	plasma membrane	60.26	61.0
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	60.39	60.93
VIT_09s0002g05600.t01	Wine grape	mitochondrion	59.92	60.83
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	59.1	60.54
VIT_09s0002g05570.t01	Wine grape	plasma membrane	59.71	60.45
VIT_09s0002g05470.t01	Wine grape	cytosol	10.87	59.93
VIT_04s0008g04820.t01	Wine grape	plastid	57.4	59.55
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	25.95	58.95
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	30.37	58.58
VIT_09s0002g05360.t01	Wine grape	plasma membrane	58.97	58.29
Os10t0205500-01	Rice	cytosol, mitochondrion, peroxisome	11.96	57.7
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	58.49	57.67
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	16.64	57.51
VIT_06s0080g00050.t01	Wine grape	plasma membrane	6.39	56.63
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.28	56.23
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	59.58	56.07
VIT_09s0002g03630.t01	Wine grape	plasma membrane	52.92	55.25
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	53.19	55.1
VIT_09s0002g06930.t01	Wine grape	mitochondrion	9.92	54.68
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	5.03	54.41
VIT_05s0020g00680.t01	Wine grape	plastid	51.56	52.82
VIT_09s0002g03570.t01	Wine grape	plasma membrane	11.55	52.8
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	2.85	52.5
VIT_09s0002g03580.t01	Wine grape	plasma membrane	24.52	52.32
TraesCS4A01G372100.1	Wheat	cytosol, peroxisome, plasma membrane	50.48	51.99
VIT_11s0016g04590.t01	Wine grape	cytosol	51.49	51.32
VIT_04s0043g00970.t01	Wine grape	mitochondrion	4.89	46.75
VIT_14s0030g00590.t01	Wine grape	cytosol	5.23	46.67
VIT_07s0005g02250.t01	Wine grape	plasma membrane	9.78	43.37
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	5.91	43.07
VIT_18s0001g10650.t01	Wine grape	mitochondrion	4.89	42.86
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	6.25	37.4
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	4.55	36.81
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	11.14	35.12
VIT_09s0002g05450.t01	Wine grape	mitochondrion	5.37	33.76

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:AM426352	ProteinID:CAN62450	ProteinID:CAN62450.1	ProteinID:CCB62333
ProteinID:CCB62333.1	UniProt:F6I5W5	EMBL:FN596753	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF261
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210AB40	ArrayExpress:VIT_13s0074g00660	EnsemblPlantsGene:VIT_13s0074g00660
EnsemblPlants:VIT_13s0074g00660.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:-:8818113..8827874

Molecular Weight (calculated)

166771.0 Da

IEP (calculated)

7.148

GRAVY (calculated)

0.062

Length

1472 amino acids

Sequence
(BLAST)

0001: MAAALAGDDL ARSMSSRRKS LASGSRRSWA SASILEVLSA QGDVFQSRRE DDEEELKWAA IERLPTFERL RKGMLKQVLD DGKVVHEEVD FTNLGMQERK
0101: HLIESILKVV EEDNEKFLLR LRERTDRVGV EIPKIEVRFE HLSVEGDAYV GTRALPTLLN STMNFIEGIL GLIRLSSSKK RVVKILKDVS GIVKPSRMTL
0201: LLGPPASGKT TLLQALAGKM DKDLRMEGKI TYCGHELSEF VPQRTCAYIS QHDLHHGEMT VRETLDFSGR CLGVGTRYEL LAELSRREKE SAIKPDPEID
0301: AFMKATAMAG QETSLVTDYV LKMLGLDICA DIVLGDDMRR GISGGEKKRV TTGEMLVGPA KALFMDEIST GLDSSTTFQI VKFMRQMVHI MEVTMIISLL
0401: QPAPETYDLF DAIILLCEGQ IVYQGPRENI LEFFESVGFK CPKRKGVADF LQEVTSRKEQ EQYWFRHNEP YKYISVPEFA QHFNSFHIGQ KLSDDLGIPY
0501: NKSRTHPAAL VTEKYGISNW ELFKACFARE WLLMKRNSFI YIFKTTQITI MSVIAMTVFF RTEMKHGQLQ DGVKFYGALF YSLINVMFNG MAELALTLFR
0601: LPVFFKQRDF LFYPAWAFAL PIWVLRIPLS LMESGIWIIL TYYTIGFAPS ASRFFRQLLA FFGVHQMALS LFRFIAALGR TQIVANTLGT FTLLLVFVLG
0701: GFIVAKDDIE PWMIWGYYAS PMTYGQNALV INEFLDDRWS APNIDQRIPE PTVGKALLKA RGMFVDGYWY WICVGALMGF SLLFNICFIV ALTYLDPLGD
0801: SKSVIIDEEN EEKSEKQFFS NKQHDLTTPE RNSATAPMSE GIDMEVRKTR ESTKSVVKDA NHTPTKRGMV LPFQPLSLAF EHVNYYVDMP AGMKSQGIEA
0901: DRLQLLRDAS GAFRPGIQIA LVGVSGAGKT TLMDVLAGRK TGGYIEGSIS ISGYPKNQAT FARISGYCEQ NDIHSPNVTV YESLVYSAWL RLAPDVFVEE
1001: VMELVELHPL RDALVGLPGI HGLSTEQRKR LTVAVELVAN PSILFMDEPT TGLDARAAAV VMRTVRNTVD TGRTVVCTIH QPSIDIFEAF DELLLMKRGG
1101: QIIYAGALGR NSHKLVEYFE AVPGVPKVRD GQNPATWMLE ISSAAVEAQL GVDFAEIYAK SELYQRNQEL IKELSTPSPG SKDLYFPTKY SQSFISQCKA
1201: CFWKQHWSYW RNPPYNAIRF FLTIIIGVLF GVIFWNKGEK TDKEQDLINL LGAMFSAVFF LGATNTSSVQ PVVAIERTVF YRERAAGMYS ALPYAFAQVA
1301: IEAIYVAIQT LVYSLLLYSM MGFYWRVDKF LWFYYYLLMC FIYFTLYGMM IVALTPNHQI AAIVMSFFLS FWNLFAGFLI PRMQIPIWWR WYYWASPVSW
1401: TIYGLVTSQV GDKEDPVQVP GAGVKSVKLY LKEALGFEYD FLGAVALAHI GWVLLFLFVF AYGIKFLNFQ RR

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.