Factsheet for VIT_06s0061g01460.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00050.t01	Wine grape	plasma membrane	91.18	74.7
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	19.85	33.75
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	32.35	24.18
TraesCS4A01G354600.1	Wheat	plasma membrane	33.82	18.85
VIT_09s0002g03570.t01	Wine grape	plasma membrane	36.03	15.22
GSMUA_Achr7P05940_001	Banana	plasma membrane	34.56	14.03
VIT_07s0005g02250.t01	Wine grape	plasma membrane	25.74	10.54
VIT_06s0061g01470.t01	Wine grape	mitochondrion	57.35	6.95
VIT_06s0061g01480.t01	Wine grape	plastid	66.18	6.16
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.15	5.44
VIT_06s0080g00040.t01	Wine grape	plastid	56.62	5.11
VIT_13s0074g00660.t01	Wine grape	plastid	54.41	5.03
VIT_13s0074g00700.t01	Wine grape	plastid	54.41	5.0
VIT_09s0002g05490.t01	Wine grape	mitochondrion	41.91	4.46
VIT_09s0002g05600.t01	Wine grape	mitochondrion	41.18	3.86
VIT_09s0002g05570.t01	Wine grape	plasma membrane	41.18	3.85
VIT_09s0002g05590.t01	Wine grape	plasma membrane	41.18	3.85
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	41.18	3.84
VIT_09s0002g05360.t01	Wine grape	plasma membrane	41.91	3.83
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	39.71	3.76
VIT_04s0008g04820.t01	Wine grape	plastid	38.97	3.74
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.24	3.66
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	41.91	3.64
VIT_11s0016g04590.t01	Wine grape	cytosol	38.97	3.59
VIT_09s0002g03630.t01	Wine grape	plasma membrane	36.76	3.55
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	36.76	3.35
VIT_05s0020g00680.t01	Wine grape	plastid	35.29	3.34
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	33.09	3.17
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	7.35	2.14
VIT_09s0002g05510.t01	Wine grape	cytosol	2.94	1.96
VIT_09s0002g05450.t01	Wine grape	mitochondrion	2.21	1.28
VIT_18s0001g10650.t01	Wine grape	mitochondrion	0.0	0.0
CDY68759	Canola	mitochondrion	0.0	0.0
VIT_14s0030g00590.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g06930.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g06940.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05470.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
VIT_09s0002g05380.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03580.t01	Wine grape	plasma membrane	0.0	0.0
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	0.0	0.0
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
VIT_07s0005g02330.t01	Wine grape	cytosol	0.0	0.0
VIT_04s0043g00970.t01	Wine grape	mitochondrion	0.0	0.0
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	0.0	0.0
VIT_02s0012g02770.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	InterPro:ABC_2_trans	ProteinID:CBI17069	ProteinID:CBI17069.3	UniProt:D7SN40	EMBL:FN594957
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626
GO:GO:0055085	PFAM:PF01061	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	TMHMM:TMhelix	UniParc:UPI0001BE0E4D
ArrayExpress:VIT_06s0061g01460	EnsemblPlantsGene:VIT_06s0061g01460	EnsemblPlants:VIT_06s0061g01460.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:19330192..19330682

Molecular Weight (calculated)

15608.0 Da

IEP (calculated)

6.517

GRAVY (calculated)

0.629

Length

136 amino acids

Sequence
(BLAST)

001: MVVALTPGHQ IAAIVSSFVV SFWNSFSGFL ISWPLIQVWW RWYYWASPVA WTINGAIASQ VADKTSPLEI PGRDPMPVNE FLKENFGFDH DFRVPVVFAL
101: LGWVFLFFFV FAYGIKFLNF VFANGKSIEV MDMLKI

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.