Factsheet for VIT_07s0005g02350.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	22.76	27.72
VIT_09s0018g00900.t01	Wine grape	mitochondrion	9.76	16.9
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	36.18	13.73
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	35.77	11.53
VIT_09s0002g06930.t01	Wine grape	mitochondrion	10.98	10.11
VIT_09s0002g03580.t01	Wine grape	plasma membrane	23.58	8.41
VIT_05s0020g00680.t01	Wine grape	plastid	46.34	7.93
VIT_09s0002g05490.t01	Wine grape	mitochondrion	34.55	6.65
VIT_04s0008g04820.t01	Wine grape	plastid	36.18	6.27
VIT_13s0074g00660.t01	Wine grape	plastid	37.4	6.25
VIT_13s0074g00700.t01	Wine grape	plastid	37.4	6.22
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	36.59	6.03
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	34.15	5.85
VIT_09s0002g05600.t01	Wine grape	mitochondrion	34.15	5.79
VIT_09s0002g05590.t01	Wine grape	plasma membrane	34.15	5.78
VIT_09s0002g05570.t01	Wine grape	plasma membrane	34.15	5.78
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	34.15	5.76
VIT_06s0061g01480.t01	Wine grape	plastid	33.74	5.68
VIT_09s0002g05360.t01	Wine grape	plasma membrane	34.15	5.64
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	31.71	5.49
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	34.55	5.43
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	30.08	5.37
VIT_06s0080g00040.t01	Wine grape	plastid	32.52	5.31
VIT_11s0016g04590.t01	Wine grape	cytosol	31.3	5.21
VIT_09s0002g03630.t01	Wine grape	plasma membrane	29.27	5.11
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	28.46	4.93
VIT_06s0061g01470.t01	Wine grape	mitochondrion	12.6	2.76
VIT_06s0080g00050.t01	Wine grape	plasma membrane	0.81	1.2
VIT_07s0005g02330.t01	Wine grape	cytosol	0.41	0.68
VIT_09s0002g05380.t01	Wine grape	cytosol	0.41	0.68
VIT_07s0005g02250.t01	Wine grape	plasma membrane	0.81	0.6
Solyc04g076170.1.1	Tomato	cytosol	0.41	0.53
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	0.81	0.43
VIT_09s0002g05470.t01	Wine grape	cytosol	0.41	0.37
VIT_14s0030g00590.t01	Wine grape	cytosol	0.0	0.0
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g06940.t01	Wine grape	cytosol	0.0	0.0
VIT_18s0001g10650.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g05510.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05450.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03570.t01	Wine grape	plasma membrane	0.0	0.0
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	0.0	0.0
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_04s0043g00970.t01	Wine grape	mitochondrion	0.0	0.0
VIT_02s0012g02770.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:CCB60061	ProteinID:CCB60061.1
ncoils:Coil	UniProt:F6HZE6	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006259
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015074	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF14510	PANTHER:PTHR19241
PANTHER:PTHR19241:SF259	SUPFAM:SSF52540	UniParc:UPI000210945E	ArrayExpress:VIT_07s0005g02350	EnsemblPlantsGene:VIT_07s0005g02350	EnsemblPlants:VIT_07s0005g02350.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:4698880..4701213

Molecular Weight (calculated)

27747.7 Da

IEP (calculated)

9.291

GRAVY (calculated)

-0.333

Length

246 amino acids

Sequence
(BLAST)

001: MAQFLGRDEK ESLGMELAEL GRSIGSPFHH HTSSFRSRTS DAKSYKEKDD EVDLQWAAIE RLPTFERVRT SLFGHHGLND GKEELGKRVI HVTKLGALEC
101: NVFIDKLLKK IEENNHQLLQ KLREGMDRVG LEFPTVEVRY QNLSIEAECE VVHGEPLPTL WNTLKSTFHA IKNFTRCKSQ ANMIKILKDV SGIIKPSRMT
201: LLLGPPGCGK TTLLLALAGR LKQPLKTQSQ SLFCSIIFSF SISRST

Best Arabidopsis Sequence Match ( AT2G37280.1 )
(BLAST)

0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR

Arabidopsis Description

PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.