Factsheet for VIT_09s0002g05470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05380.t01	Wine grape	cytosol	44.57	80.41
VIT_07s0005g02330.t01	Wine grape	cytosol	29.96	54.42
VIT_09s0018g00900.t01	Wine grape	mitochondrion	15.36	28.87
VIT_09s0002g06930.t01	Wine grape	mitochondrion	24.72	24.72
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	69.29	24.25
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	56.18	23.15
VIT_09s0002g03580.t01	Wine grape	plasma membrane	51.31	19.86
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	30.71	17.56
VIT_09s0002g05600.t01	Wine grape	mitochondrion	74.53	13.72
VIT_09s0002g05590.t01	Wine grape	plasma membrane	74.53	13.69
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	74.16	13.57
VIT_09s0002g05570.t01	Wine grape	plasma membrane	73.03	13.41
VIT_09s0002g05360.t01	Wine grape	plasma membrane	72.66	13.03
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	74.91	12.79
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	67.42	12.53
VIT_04s0008g04820.t01	Wine grape	plastid	62.92	11.84
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.93	11.61
VIT_06s0061g01480.t01	Wine grape	plastid	61.42	11.23
VIT_06s0061g01470.t01	Wine grape	mitochondrion	46.82	11.14
VIT_06s0080g00040.t01	Wine grape	plastid	62.17	11.02
VIT_13s0074g00660.t01	Wine grape	plastid	59.93	10.87
VIT_13s0074g00700.t01	Wine grape	plastid	59.93	10.81
VIT_11s0016g04590.t01	Wine grape	cytosol	58.43	10.56
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	56.93	10.18
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	53.93	10.13
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	53.56	10.06
VIT_09s0002g03630.t01	Wine grape	plasma membrane	52.06	9.86
VIT_05s0020g00680.t01	Wine grape	plastid	52.06	9.67
VIT_09s0002g05490.t01	Wine grape	mitochondrion	45.69	9.54
VIT_14s0030g00590.t01	Wine grape	cytosol	3.37	5.45
VIT_06s0080g00050.t01	Wine grape	plasma membrane	1.87	3.01
VIT_04s0043g00970.t01	Wine grape	mitochondrion	1.5	2.6
VIT_09s0002g05450.t01	Wine grape	mitochondrion	1.12	1.28
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.37	0.5
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.37	0.41
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_18s0001g10650.t01	Wine grape	mitochondrion	0.0	0.0
KRH13454	Soybean	cytosol	0.0	0.0
VIT_09s0002g06940.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g05510.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03570.t01	Wine grape	plasma membrane	0.0	0.0
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	0.0	0.0
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.0	0.0
VIT_07s0005g02250.t01	Wine grape	plasma membrane	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_02s0012g02770.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CCB59530	ProteinID:CCB59530.1	UniProt:F6HX60	EMBL:FN596494
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626
GO:GO:0055085	InterPro:P-loop_NTPase	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000210A4E2	ArrayExpress:VIT_09s0002g05470	EnsemblPlantsGene:VIT_09s0002g05470	EnsemblPlants:VIT_09s0002g05470.t01	SEG:seg	:

Description

No Description!

Coordinates

chr9:-:5196786..5198428

Molecular Weight (calculated)

30386.5 Da

IEP (calculated)

8.320

GRAVY (calculated)

0.043

Length

267 amino acids

Sequence
(BLAST)

001: MLAELARREK TSNIKLDPDI NVFMKAVATE GQKKSVVTDH IMKILGLDIC ADIMVGDEMI RGIFGGQRKR VTTGEMLVGP SKALFMDEIS TGLDNSTTCQ
101: IVNSLRQTIH ILNGIAVISL FQPPLETCDF FYDIILLFDN FLQEVTSRKD HEQYWTLKNE PYRFAIAKEF VEAFQSFHVG EQLAKELATP INKAKSHPTA
201: LTTKKYGISK KELLVAYLSR EHLLMKRNSF VYILKLIQLI IMALIAMTLF LRTHMHKCSM EDGIYGF

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.