Factsheet for VIT_09s0018g00900.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05380.t01	Wine grape	cytosol	28.17	27.03
VIT_09s0002g06930.t01	Wine grape	mitochondrion	50.0	26.59
VIT_07s0005g02330.t01	Wine grape	cytosol	23.94	23.13
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	97.89	18.22
VIT_09s0002g05470.t01	Wine grape	cytosol	28.87	15.36
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	67.61	14.81
VIT_09s0002g03580.t01	Wine grape	plasma membrane	58.45	12.03
VIT_04s0008g04820.t01	Wine grape	plastid	99.3	9.94
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	16.9	9.76
VIT_09s0002g05490.t01	Wine grape	mitochondrion	79.58	8.84
OQU87144	Sorghum	plasma membrane	75.35	8.35
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	80.28	7.93
VIT_06s0061g01470.t01	Wine grape	mitochondrion	62.68	7.93
VIT_09s0002g05600.t01	Wine grape	mitochondrion	80.28	7.86
PGSC0003DMT400034124	Potato	plastid	78.87	7.85
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	80.28	7.81
VIT_09s0002g05570.t01	Wine grape	plasma membrane	79.58	7.77
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.46	7.74
VIT_09s0002g05590.t01	Wine grape	plasma membrane	78.87	7.7
VIT_09s0002g05360.t01	Wine grape	plasma membrane	78.17	7.45
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	79.58	7.23
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	71.83	7.18
VIT_11s0016g04590.t01	Wine grape	cytosol	72.54	6.97
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.61	6.97
VIT_13s0074g00700.t01	Wine grape	plastid	69.01	6.62
VIT_06s0061g01480.t01	Wine grape	plastid	66.9	6.51
VIT_05s0020g00680.t01	Wine grape	plastid	65.49	6.47
VIT_13s0074g00660.t01	Wine grape	plastid	66.9	6.45
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	67.61	6.43
VIT_06s0080g00040.t01	Wine grape	plastid	65.49	6.18
VIT_09s0002g03630.t01	Wine grape	plasma membrane	58.45	5.89
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	8.45	2.57
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	2.11	1.49
VIT_06s0080g00050.t01	Wine grape	plasma membrane	1.41	1.2
VIT_07s0005g02250.t01	Wine grape	plasma membrane	0.7	0.3
VIT_14s0030g00590.t01	Wine grape	cytosol	0.0	0.0
VIT_18s0001g10650.t01	Wine grape	mitochondrion	0.0	0.0
VIT_12s0057g00280.t01	Wine grape	cytosol	0.0	0.0
VIT_02s0012g02770.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g03570.t01	Wine grape	plasma membrane	0.0	0.0
VIT_09s0002g06940.t01	Wine grape	cytosol	0.0	0.0
VIT_04s0043g00970.t01	Wine grape	mitochondrion	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_09s0002g05510.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0002g05450.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05440.t01	Wine grape	cytosol	0.0	0.0
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.0	0.0
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	0.0	0.0

Protein Annotations

ArrayExpress:VIT_09s0018g00900	EMBL:FN595513	EnsemblPlants:VIT_09s0018g00900.t01	EnsemblPlantsGene:VIT_09s0018g00900	Gene3D:3.40.50.300	InterPro:P-loop_NTPase
PANTHER:PTHR19241	PANTHER:PTHR19241:SF443	ProteinID:CCB49685	ProteinID:CCB49685.1	SEG:seg	SUPFAM:SSF52540
UniParc:UPI00021095CA	UniProt:F6HBW7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr9:+:17482642..17483150

Molecular Weight (calculated)

15354.6 Da

IEP (calculated)

5.761

GRAVY (calculated)

-0.104

Length

142 amino acids

Sequence
(BLAST)

001: MTLLLGPPSS GKTRLLLALA GRLGSDLKVS GRVTYNGHGM DEFVPQRTSA YTSQYDLHAG EMTVRETLDF SARCQGVGGL SDMLAELSRR EKAANIKPDP
101: DIDIYMKAAA LEGQKTSVVT EYMLKILGLE ICADTLVGDV MK

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.