Factsheet for VIT_04s0043g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g02770.t01	Wine grape	cytosol	56.49	95.6
VIT_12s0057g00280.t01	Wine grape	cytosol	37.66	93.55
VIT_14s0030g00590.t01	Wine grape	cytosol	66.23	61.82
VIT_18s0001g10650.t01	Wine grape	mitochondrion	57.79	52.98
Solyc02g055540.1.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus, vacuole	22.73	16.05
VIT_09s0002g06940.t01	Wine grape	cytosol	24.68	15.83
VIT_07s0005g02250.t01	Wine grape	plasma membrane	29.87	13.86
PGSC0003DMT400018880	Potato	plasma membrane	24.03	9.84
VIT_09s0002g03560.t01	Wine grape	endoplasmic reticulum, golgi, plastid	25.97	9.39
HORVU6Hr1G019080.3	Barley	plasma membrane	47.4	7.98
VIT_04s0008g04820.t01	Wine grape	plastid	62.34	6.77
VIT_09s0002g05490.t01	Wine grape	mitochondrion	55.84	6.72
OQU85489	Sorghum	cytosol, peroxisome, plasma membrane	55.84	6.27
VIT_09s0002g05600.t01	Wine grape	mitochondrion	57.79	6.14
VIT_09s0002g05410.t01	Wine grape	plasma membrane, plastid	56.49	6.05
VIT_09s0002g05590.t01	Wine grape	plasma membrane	57.14	6.05
VIT_09s0002g05530.t01	Wine grape	plasma membrane, plastid	57.14	6.03
VIT_06s0061g01470.t01	Wine grape	mitochondrion	43.51	5.97
VIT_09s0002g05570.t01	Wine grape	plasma membrane	55.19	5.85
VIT_09s0002g05360.t01	Wine grape	plasma membrane	55.19	5.71
VIT_09s0002g05400.t01	Wine grape	mitochondrion, plasma membrane	56.49	5.56
VIT_11s0016g04590.t01	Wine grape	cytosol	52.6	5.48
VIT_13s0074g00690.t01	Wine grape	cytosol, peroxisome, plasma membrane	48.05	5.37
VIT_09s0002g03630.t01	Wine grape	plasma membrane	48.05	5.25
VIT_06s0061g01480.t01	Wine grape	plastid	49.35	5.21
VIT_06s0080g00040.t01	Wine grape	plastid	50.65	5.18
VIT_05s0020g00680.t01	Wine grape	plastid	48.05	5.15
VIT_04s0008g04230.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	45.45	4.93
VIT_13s0074g00660.t01	Wine grape	plastid	46.75	4.89
VIT_09s0002g03640.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	46.75	4.82
VIT_13s0074g00700.t01	Wine grape	plastid	46.1	4.8
VIT_11s0016g04540.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.16	4.79
VIT_09s0002g05510.t01	Wine grape	cytosol	5.19	3.92
VIT_07s0005g02240.t01	Wine grape	cytosol, golgi, mitochondrion, nucleus	7.79	2.57
VIT_09s0002g05450.t01	Wine grape	mitochondrion	3.25	2.14
VIT_07s0005g02330.t01	Wine grape	cytosol	1.95	2.04
VIT_09s0002g05380.t01	Wine grape	cytosol	1.95	2.03
VIT_09s0002g03580.t01	Wine grape	plasma membrane	7.79	1.74
VIT_09s0002g05440.t01	Wine grape	cytosol	1.3	1.56
VIT_09s0002g03570.t01	Wine grape	plasma membrane	3.25	1.55
VIT_09s0002g05470.t01	Wine grape	cytosol	2.6	1.5
VIT_04s0008g04830.t01	Wine grape	cytosol, plastid	7.14	1.44
VIT_09s0002g03550.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	5.84	1.39
VIT_09s0002g06930.t01	Wine grape	mitochondrion	1.95	1.12
VIT_06s0080g00050.t01	Wine grape	plasma membrane	0.65	0.6
VIT_07s0005g02320.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	0.65	0.55
VIT_09s0002g05540.t01	Wine grape	extracellular, golgi	0.0	0.0
VIT_06s0061g01460.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_09s0018g00900.t01	Wine grape	mitochondrion	0.0	0.0
VIT_09s0002g05390.t01	Wine grape	cytosol, mitochondrion, nucleus	0.0	0.0
VIT_07s0005g02350.t01	Wine grape	cytosol, nucleus, peroxisome	0.0	0.0
Bra012798.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_04s0043g00970	EMBL:FN595763	EnsemblPlants:VIT_04s0043g00970.t01	EnsemblPlantsGene:VIT_04s0043g00970	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437
ProteinID:CCB51882	ProteinID:CCB51882.1	UniParc:UPI00021092EE	UniProt:F6HI36	MapMan:35.1	:

Description

No Description!

Coordinates

chr4:+:15585636..15587835

Molecular Weight (calculated)

17152.7 Da

IEP (calculated)

7.161

GRAVY (calculated)

0.032

Length

154 amino acids

Sequence
(BLAST)

001: MQKLVDYIGL PCRIARGCKY CVANALLHFS RVSLSHGFDA HSYGRVFSCK MVTSLKLGTL GRTVVCTIHQ PSIDIFDAFD ELFLLKQGGE EIYAGPLEHH
101: SAHLIKYFEG IDGVSKIKDG YNPATWMLEV TSAAQEAALG INFTDVYKNS ELYR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.