Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- plastid 1
- vacuole 4
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19306 | Canola | extracellular | 75.84 | 76.27 |
| CDY39499 | Canola | extracellular | 73.6 | 74.86 |
| KRH25440 | Soybean | extracellular, plasma membrane | 26.97 | 53.33 |
| KRH22509 | Soybean | extracellular | 35.39 | 44.37 |
| KRH26848 | Soybean | extracellular, plasma membrane | 34.27 | 42.66 |
| Solyc07g052680.1.1 | Tomato | extracellular, plasma membrane | 35.96 | 42.38 |
| PGSC0003DMT400067292 | Potato | extracellular, plasma membrane | 35.39 | 42.0 |
| VIT_12s0059g02660.t01 | Wine grape | extracellular | 30.9 | 40.15 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821769 | ProteinID:AEE76586.1 | ArrayExpress:AT3G22070 | EnsemblPlantsGene:AT3G22070 | RefSeq:AT3G22070 |
| TAIR:AT3G22070 | RefSeq:AT3G22070-TAIR-G | EnsemblPlants:AT3G22070.1 | TAIR:AT3G22070.1 | ProteinID:BAB01392.1 | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_566698.1 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009010 |
| PO:PO:0009046 | PRINTS:PR01217 | PANTHER:PTHR36036 | PANTHER:PTHR36036:SF1 | UniProt:Q9LRJ8 | TMHMM:TMhelix |
| UniParc:UPI00000A0E0B | SEG:seg | : | : | : | : |
Description
Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q9LRJ8]
Coordinates
chr3:-:7775329..7776109
Molecular Weight (calculated)
18142.2 Da
IEP (calculated)
6.051
GRAVY (calculated)
-0.219
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCYVGKATK IFIFIVTVVF VIGLVVAFGV LRRHSHHCSG DYCSSSTDPS SSSSSSSSST SPFITPFPNP NPNPNPNPPV LGSSPPSPTD SSSSTSISPN
101: PPAPIVNPNP PPPSTPNPPP EFSPPPPDLD TTTAPPPPST DIPIPPPPPA PVSASPPLTP PSSVVTSPAP VHAKLVND
101: PPAPIVNPNP PPPSTPNPPP EFSPPPPDLD TTTAPPPPST DIPIPPPPPA PVSASPPLTP PSSVVTSPAP VHAKLVND
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.