Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25272 | Canola | nucleus | 41.12 | 49.17 |
| Bra033157.1-P | Field mustard | nucleus | 40.77 | 48.75 |
| CDX94230 | Canola | nucleus | 39.37 | 45.75 |
| AT5G03060.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 37.98 | 37.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:826711 | ProteinID:AEE82972.1 | ProteinID:AEE82973.1 | ArrayExpress:AT4G11100 | EnsemblPlantsGene:AT4G11100 |
| RefSeq:AT4G11100 | TAIR:AT4G11100 | RefSeq:AT4G11100-TAIR-G | EnsemblPlants:AT4G11100.1 | TAIR:AT4G11100.1 | EMBL:AY065358 |
| EMBL:AY096700 | Unigene:At.28519 | ncoils:Coil | GO:GO:0005575 | GO:GO:0008150 | RefSeq:NP_001078373.1 |
| RefSeq:NP_567374.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| UniProt:Q8VZ24 | UniParc:UPI000009C8C2 | SEG:seg | : | : | : |
Description
Gelsolin protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ24]
Coordinates
chr4:+:6768614..6770285
Molecular Weight (calculated)
32322.6 Da
IEP (calculated)
4.732
GRAVY (calculated)
-0.966
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFGLEKTMT LEHEILKENH ETLLKDYESL QERIKHAEEA YEAIKLHHEN KAKELEVSNK RLLEECMKER REKAKVRKTF EEMKKTMESE RTAIVDELKS
101: KNQELLLGKK KEEEELVKME NKYVELAEKF DVVEKECAYL KSLYDAEVVA SVTQSAVISG VGETDNLIGQ GENEANQNVN NAVTDAIMIS DDENDNNPPI
201: ESNISSHRSG DRNQEEEGRN RGNSATENRA SGETFTPVSA NHPPPFSPSS SSSSSSSSDG AEIVLKLPRN WPEWAIPKGP GKDSNKP
101: KNQELLLGKK KEEEELVKME NKYVELAEKF DVVEKECAYL KSLYDAEVVA SVTQSAVISG VGETDNLIGQ GENEANQNVN NAVTDAIMIS DDENDNNPPI
201: ESNISSHRSG DRNQEEEGRN RGNSATENRA SGETFTPVSA NHPPPFSPSS SSSSSSSSDG AEIVLKLPRN WPEWAIPKGP GKDSNKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.