Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033157.1-P | Field mustard | nucleus | 99.58 | 99.58 |
| CDX94230 | Canola | nucleus | 90.83 | 88.26 |
| AT4G11100.1 | Thale cress | nucleus | 49.17 | 41.12 |
| CDX70331 | Canola | nucleus | 33.33 | 30.77 |
| CDY10408 | Canola | nucleus | 33.33 | 29.52 |
Protein Annotations
| EnsemblPlants:CDY25272 | EnsemblPlantsGene:GSBRNA2T00029328001 | ncoils:Coil | ProteinID:CDY25272 | ProteinID:CDY25272.1 | SEG:seg |
| UniParc:UPI0004EF0145 | UniProt:A0A078GJA4 | MapMan:35.2 | : | : | : |
Description
BnaA02g21840DBnaA02g21840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJA4]
Coordinates
chrLK032172:+:389244..390266
Molecular Weight (calculated)
26654.9 Da
IEP (calculated)
5.823
GRAVY (calculated)
-0.956
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTSDKAGK NSKGVRLATV KDESASSSKG NSCTKIEYEI LKENHETLKV DYESLQKRVK LAEETYEVMK KLLQSKAEGL EVTNARLVED CARERSDKDK
101: YRKMESERKA KMDELRKREE ELLMATRKGK EDSAELESKF VALAERFCVV EADCSYLKSL YDAEVAASGN NNANNDATVI SDHNDQCKKQ ERAVTNHHSP
201: PSSASPSSSS SDGYDVVFKL PANWPEWATP KGPGDDSSKS
101: YRKMESERKA KMDELRKREE ELLMATRKGK EDSAELESKF VALAERFCVV EADCSYLKSL YDAEVAASGN NNANNDATVI SDHNDQCKKQ ERAVTNHHSP
201: PSSASPSSSS SDGYDVVFKL PANWPEWATP KGPGDDSSKS
001: MMFGLEKTMT LEHEILKENH ETLLKDYESL QERIKHAEEA YEAIKLHHEN KAKELEVSNK RLLEECMKER REKAKVRKTF EEMKKTMESE RTAIVDELKS
101: KNQELLLGKK KEEEELVKME NKYVELAEKF DVVEKECAYL KSLYDAEVVA SVTQSAVISG VGETDNLIGQ GENEANQNVN NAVTDAIMIS DDENDNNPPI
201: ESNISSHRSG DRNQEEEGRN RGNSATENRA SGETFTPVSA NHPPPFSPSS SSSSSSSSDG AEIVLKLPRN WPEWAIPKGP GKDSNKP
101: KNQELLLGKK KEEEELVKME NKYVELAEKF DVVEKECAYL KSLYDAEVVA SVTQSAVISG VGETDNLIGQ GENEANQNVN NAVTDAIMIS DDENDNNPPI
201: ESNISSHRSG DRNQEEEGRN RGNSATENRA SGETFTPVSA NHPPPFSPSS SSSSSSSSDG AEIVLKLPRN WPEWAIPKGP GKDSNKP
Arabidopsis Description
Gelsolin protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ24]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.