Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24801 | Canola | nucleus | 36.23 | 39.37 |
| CDY35449 | Canola | nucleus | 36.23 | 38.17 |
| AT4G23780.1 | Thale cress | nucleus | 46.38 | 37.21 |
| Bra010544.1-P | Field mustard | nucleus | 34.06 | 37.01 |
Protein Annotations
| MapMan:35.2 | EntrezGene:828477 | UniProt:A0A178UZA9 | ProteinID:AEE84804.1 | ProteinID:ANM67897.1 | ArrayExpress:AT4G23770 |
| EnsemblPlantsGene:AT4G23770 | RefSeq:AT4G23770 | TAIR:AT4G23770 | RefSeq:AT4G23770-TAIR-G | EnsemblPlants:AT4G23770.1 | TAIR:AT4G23770.1 |
| EMBL:BT004285 | EMBL:BT005614 | ncoils:Coil | GO:GO:0003674 | GO:GO:0008150 | RefSeq:NP_001329693.1 |
| RefSeq:NP_194108.2 | ProteinID:OAO98873.1 | PO:PO:0000293 | UniProt:Q84JI2 | UniParc:UPI000000C31E | : |
Description
Uncharacterized protein At4g23770 [Source:UniProtKB/TrEMBL;Acc:Q84JI2]
Coordinates
chr4:-:12383164..12384496
Molecular Weight (calculated)
16138.1 Da
IEP (calculated)
5.124
GRAVY (calculated)
-0.796
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRLDQLVN KYNKSCENVS FAEHMILKDK YESLVIEHES LIKTLELLEK THGFTVEDLV TKQKEALEKK EVIEKWENKF GEMEKKLKTV ERSIEYIMSV
101: DVQTGVDSDM STSEDDDGNR RQRKGRLINS SDHDHFIL
101: DVQTGVDSDM STSEDDDGNR RQRKGRLINS SDHDHFIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.