Factsheet for Bra013495.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79027	Canola	cytosol, mitochondrion	98.96	98.96
CDX82793	Canola	cytosol, mitochondrion	73.96	94.67
Bra038787.1-P	Field mustard	cytosol, mitochondrion	69.79	78.82
Solyc11g020860.1.1	Tomato	cytosol	40.62	48.15
Bra014874.1-P	Field mustard	cytosol, plastid	45.83	47.83
PGSC0003DMT400029139	Potato	plastid	41.67	47.06
PGSC0003DMT400059173	Potato	plastid	41.67	47.06
PGSC0003DMT400023953	Potato	cytosol	39.58	45.78
PGSC0003DMT400028963	Potato	cytosol, plastid	38.54	44.05
PGSC0003DMT400059172	Potato	cytosol, plastid	37.5	42.35
Bra032371.1-P	Field mustard	plastid	42.71	42.27
KRH58694	Soybean	cytosol, mitochondrion	37.5	40.45
KRH42584	Soybean	cytosol, mitochondrion	36.46	38.89

Protein Annotations

EnsemblPlants:Bra013495.1	EnsemblPlants:Bra013495.1-P	EnsemblPlantsGene:Bra013495	PANTHER:PTHR35101	PANTHER:PTHR35101:SF1	SEG:seg
UniParc:UPI0002546DB1	UniProt:M4DAI5	MapMan:35.2	:	:	:

Description

AT4G21060 (E=1e-017) | galactosyltransferase family protein

Coordinates

chrA01:+:5976868..5977158

Molecular Weight (calculated)

10789.8 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.520

Length

96 amino acids

Sequence
(BLAST)

1: MATSRLARFV SEVAPPQFVT VMRRHRAAKQ KLDTIKEEEY KDDCFTGGMM MTMMSNKMAS SHHHAYSSSS TSVSSSGSTS KSFHVDVRRS FSVFEN

Best Arabidopsis Sequence Match ( AT1G30260.1 )
(BLAST)

1: MATSRLARFI TEVAPPQFVT VMRRRTAKVL DTIKEEEREV GTDSIFPSSF NSKKISSPFT SPYSSSVSSA SASASCTSGL NKFPVTENRG SFPVFKN

Arabidopsis Description

At1g30260/F12P21_9 [Source:UniProtKB/TrEMBL;Acc:Q9C754]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.