Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30260.1 | KRH13399 | AT5G13810.1 | 21798944 |
| AT1G30260.1 | KRH20755 | AT5G13810.1 | 21798944 |
| AT1G30260.1 | KRH62918 | AT5G13810.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42584 | Soybean | cytosol, mitochondrion | 82.02 | 81.11 |
| Solyc11g020860.1.1 | Tomato | cytosol | 47.19 | 51.85 |
| PGSC0003DMT400059173 | Potato | plastid | 49.44 | 51.76 |
| PGSC0003DMT400029139 | Potato | plastid | 49.44 | 51.76 |
| PGSC0003DMT400028963 | Potato | cytosol, plastid | 48.31 | 51.19 |
| PGSC0003DMT400023953 | Potato | cytosol | 46.07 | 49.4 |
| PGSC0003DMT400059172 | Potato | cytosol, plastid | 46.07 | 48.24 |
| Bra014874.1-P | Field mustard | cytosol, plastid | 46.07 | 44.57 |
| AT1G30260.1 | Thale cress | mitochondrion | 47.19 | 43.3 |
| CDY26279 | Canola | plastid | 46.07 | 42.27 |
| Bra032371.1-P | Field mustard | plastid | 46.07 | 42.27 |
| CDX82793 | Canola | cytosol, mitochondrion | 34.83 | 41.33 |
| CDY49624 | Canola | plastid | 43.82 | 40.21 |
| CDY58488 | Canola | cytosol, mitochondrion | 37.08 | 38.82 |
| CDX94021 | Canola | cytosol, mitochondrion | 37.08 | 38.82 |
| Bra038787.1-P | Field mustard | cytosol, mitochondrion | 37.08 | 38.82 |
| CDX79027 | Canola | cytosol, mitochondrion | 41.57 | 38.54 |
| Bra013495.1-P | Field mustard | cytosol, mitochondrion | 40.45 | 37.5 |
| CDX77604 | Canola | plastid | 46.07 | 30.37 |
Protein Annotations
| EMBL:ACUP02003282 | EnsemblPlants:KRH58694 | EnsemblPlantsGene:GLYMA_05G143000 | PANTHER:PTHR35101 | PANTHER:PTHR35101:SF9 | ProteinID:KRH58694 |
| ProteinID:KRH58694.1 | SEG:seg | UniParc:UPI0002952C55 | UniProt:K7KQ80 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr5:+:33649628..33650544
Molecular Weight (calculated)
9816.8 Da
IEP (calculated)
10.562
GRAVY (calculated)
-0.255
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MANSRIARFF MEVAPPQYVT VMRHRTSKML DTITEDEREI STSDSVMSPP KKSKSAVAVA ASSASASVTN VKGRCFLKEV HRSLSILNQ
1: MATSRLARFI TEVAPPQFVT VMRRRTAKVL DTIKEEEREV GTDSIFPSSF NSKKISSPFT SPYSSSVSSA SASASCTSGL NKFPVTENRG SFPVFKN
Arabidopsis Description
At1g30260/F12P21_9 [Source:UniProtKB/TrEMBL;Acc:Q9C754]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.