Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • peroxisome 1
  • plastid 1
  • plasma membrane 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, peroxisome, plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60536 Canola cytosol 100.0 100.0
AT5G45740.1 Thale cress nucleus 89.83 89.83
Bra038123.1-P Field mustard cytosol 66.1 68.42
Bra039670.1-P Field mustard cytosol 66.1 68.42
Bra016622.1-P Field mustard cytosol, mitochondrion, nucleus 61.86 64.04
Protein Annotations
EnsemblPlants:Bra017593.1EnsemblPlants:Bra017593.1-PEnsemblPlantsGene:Bra017593Gene3D:1.20.225.20GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0043130InterPro:DC-UbP/UBTD2_NInterPro:DC-UbP/UBTD2_N_sfInterPro:IPR038169PANTHER:PTHR13609
PANTHER:PTHR13609:SF13PFAM:PF16455SEG:segUniParc:UPI000254254DUniProt:M4DM61MapMan:35.2
Description
AT5G45740 (E=2e-054) | unknown protein
Coordinates
chrA09:+:16758175..16759301
Molecular Weight (calculated)
13376.9 Da
IEP (calculated)
6.786
GRAVY (calculated)
-0.692
Length
118 amino acids
Sequence
(BLAST)
001: MGCIGSSHAR NEGGARREKI KKPKPWAHTE PITRAQLMNM REEFWDTSPH YGGQREIWDA LRAAAEAELT LAQTIIDSAG VIVQGRDLTL CWDERGAKYE
101: LPRYVLSEPT NLIREQGQ
Best Arabidopsis Sequence Match ( AT5G45740.1 )
(BLAST)
001: MGCIGSSQAR NEGGAKRKKI MKPKPWAHTE PITRAQLTNM REEFWDTSPH YGGQREIWEA LRAAAEADLK LAQTIVDSAG VIVQNRDLTL CWDERGARYE
101: LPRYVLSEPT NLIREEGQ
Arabidopsis Description
Ubiquitin domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4KEM2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.