Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • extracellular 1
  • nucleus 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76585 Canola plastid 97.96 97.96
CDY43473 Canola plastid 97.96 97.96
AT4G16840.1 Thale cress mitochondrion 59.18 66.67
Bra023021.1-P Field mustard cytosol, golgi, mitochondrion, plastid 54.08 59.55
KRH77313 Soybean mitochondrion 32.65 38.55
VIT_00s0533g00010.t01 Wine grape cytosol 36.73 26.87
PGSC0003DMT400067520 Potato plastid 36.73 26.67
Solyc08g078060.2.1 Tomato plastid 34.69 25.95
Bra005942.1-P Field mustard cytosol 31.63 20.67
Bra029321.1-P Field mustard cytosol, plasma membrane, plastid 28.57 18.67
Bra012935.1-P Field mustard cytosol 16.33 13.56
Protein Annotations
EnsemblPlants:Bra021076.1EnsemblPlants:Bra021076.1-PEnsemblPlantsGene:Bra021076GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR34189PANTHER:PTHR34189:SF2SEG:segTMHMM:TMhelixUniParc:UPI0002546ED6UniProt:M4DX30
MapMan:35.2:::::
Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G16840](projected from arabidopsis_thaliana,AT4G16840)
Coordinates
chrA08:+:10030182..10030478
Molecular Weight (calculated)
11063.4 Da
IEP (calculated)
11.130
GRAVY (calculated)
-0.271
Length
98 amino acids
Sequence
(BLAST)
1: MRRSASGSRV SDQFSQAKPS HSRSMSRSQS VRLVEDAELH LPRYDPSSQS GKREEKSRSR SAEYVVHFIP LLLLLCVIIL WLFSRSGKPF VLGLIGSM
Best Arabidopsis Sequence Match ( AT2G35658.2 )
(BLAST)
001: MRRSASASIV SDQLSANSPS PSPSPPRIKT SADSDDSHLL LPRYDPNSHP GKKNKSRFRS AENAIHFIPI VLILCAVILW MFSNPGNQIQ FLGDKSSVHV
101: RESL
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 /.../ins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G35658]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.