Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02126 | Canola | cytosol, plasma membrane, plastid | 99.15 | 79.59 |
| CDY23048 | Canola | cytosol | 99.15 | 79.05 |
| Bra029321.1-P | Field mustard | cytosol, plasma membrane, plastid | 90.68 | 71.33 |
| AT5G61630.1 | Thale cress | cytosol, plasma membrane, plastid | 87.29 | 70.07 |
| Bra005942.1-P | Field mustard | cytosol | 59.32 | 46.67 |
| VIT_16s0013g00500.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 36.44 | 29.05 |
| KRG92188 | Soybean | cytosol, mitochondrion, plasma membrane, plastid | 33.05 | 27.46 |
| KRH34600 | Soybean | cytosol | 33.05 | 27.46 |
| Solyc05g052080.1.1 | Tomato | plastid | 27.97 | 21.85 |
| Bra023021.1-P | Field mustard | cytosol, golgi, mitochondrion, plastid | 12.71 | 16.85 |
| Bra021076.1-P | Field mustard | plastid | 13.56 | 16.33 |
Protein Annotations
Description
AT5G61630 (E=5e-026) | unknown protein
Coordinates
chrA03:-:21430362..21431155
Molecular Weight (calculated)
13056.1 Da
IEP (calculated)
4.657
GRAVY (calculated)
-0.882
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRSASWNRG TEDYSSAPPK GLWMGSMIGS LDDDELPSYN NPPEEMIKKE KSHVDVGMRE ESIAARIEGL TIEGDIDNDS DGTQTGFLGA TLELGGDSDK
101: PHHVDRNRRA SRKLIKGF
101: PHHVDRNRRA SRKLIKGF
001: MYRSASWNRV PEDYSSAPPK GLWMGSVIGP LDENELPSYN NPPEEMVKKE KSRAKFAENA IHIIPFVLLA CALVLWLFSN PDVDVGMREE SIAAKIEGLT
101: IEGDIDNDSD GTQTGFLGAT LELGDPDKPN LTDRTRRASR KLIKGFY
101: IEGDIDNDSD GTQTGFLGAT LELGDPDKPN LTDRTRRASR KLIKGFY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q1PDG7]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.