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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • plasma membrane 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34600 Soybean cytosol 96.48 96.48
AT5G07490.1 Thale cress cytosol 44.37 42.28
VIT_16s0013g00500.t01 Wine grape cytosol, peroxisome, plasma membrane 43.66 41.89
AT5G61630.1 Thale cress cytosol, plasma membrane, plastid 42.96 41.5
CDY02126 Canola cytosol, plasma membrane, plastid 42.96 41.5
Bra005942.1-P Field mustard cytosol 43.66 41.33
CDX78297 Canola cytosol 43.66 41.33
CDY23048 Canola cytosol 42.96 41.22
Bra029321.1-P Field mustard cytosol, plasma membrane, plastid 40.85 38.67
CDY42867 Canola cytosol, plasma membrane, plastid 40.85 38.67
CDY68478 Canola cytosol, plasma membrane, plastid 40.85 38.67
KRH77313 Soybean mitochondrion 21.83 37.35
Bra012935.1-P Field mustard cytosol 27.46 33.05
Solyc05g052080.1.1 Tomato plastid 34.51 32.45
Protein Annotations
EMBL:ACUP02012735EnsemblPlants:KRG92188EnsemblPlantsGene:GLYMA_20G196700EntrezGene:100805238GO:GO:0005575GO:GO:0016020
GO:GO:0016021PANTHER:PTHR34189PANTHER:PTHR34189:SF4ProteinID:KRG92188ProteinID:KRG92188.1SEG:seg
TMHMM:TMhelixUniParc:UPI000233DC19UniProt:I1NHW0MapMan:35.2::
Description
hypothetical protein
Coordinates
chr20:+:43447769..43448827
Molecular Weight (calculated)
15714.5 Da
IEP (calculated)
4.532
GRAVY (calculated)
-0.204
Length
142 amino acids
Sequence
(BLAST)
001: MHRSASWNRF SDDYFKHATT SSPSSGHRSS YSMFDGNNLP TYDPIAELAK RERARVKFAE NAVHVIPLVL IVCAIILWLF SNPDVGIIGD PIEARIEGLS
101: LEGEIENDSD GTQMGFLPIV TSEEISTTEF GAEKDSIIPK NL
Best Arabidopsis Sequence Match ( AT5G07490.1 )
(BLAST)
001: MYRSASWNRV TEDYSVPWSA PKGLWKGLDE DEPAPYDPTG QEMTKKEKSR TKFAENAVHI IPFVLLACAL VLWFFSNPDV DVGVKGDSIA ARIEGLTIEG
101: DIDNDSDGTQ TGFLGAATEV GHSKNKLKRE ANKRNRRIQA SRKVMKGFY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q1PDZ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.