Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plasma membrane 1
- cytosol 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G07490.1 | Thale cress | cytosol | 46.62 | 46.31 |
| AT5G61630.1 | Thale cress | cytosol, plasma membrane, plastid | 44.59 | 44.9 |
| CDY02126 | Canola | cytosol, plasma membrane, plastid | 44.59 | 44.9 |
| Bra005942.1-P | Field mustard | cytosol | 45.27 | 44.67 |
| CDX78297 | Canola | cytosol | 45.27 | 44.67 |
| CDY23048 | Canola | cytosol | 44.59 | 44.59 |
| KRG92188 | Soybean | cytosol, mitochondrion, plasma membrane, plastid | 41.89 | 43.66 |
| KRH34600 | Soybean | cytosol | 41.89 | 43.66 |
| Bra029321.1-P | Field mustard | cytosol, plasma membrane, plastid | 42.57 | 42.0 |
| CDY42867 | Canola | cytosol, plasma membrane, plastid | 42.57 | 42.0 |
| CDY68478 | Canola | cytosol, plasma membrane, plastid | 42.57 | 42.0 |
| VIT_00s0533g00010.t01 | Wine grape | cytosol | 37.16 | 41.04 |
| Solyc05g052080.1.1 | Tomato | plastid | 38.51 | 37.75 |
| Bra012935.1-P | Field mustard | cytosol | 29.05 | 36.44 |
Protein Annotations
| ArrayExpress:VIT_16s0013g00500 | EMBL:FN596738 | EnsemblPlants:VIT_16s0013g00500.t01 | EnsemblPlantsGene:VIT_16s0013g00500 | EntrezGene:100244287 | EntrezGene:LOC100244287 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR34189 | PANTHER:PTHR34189:SF4 | ProteinID:CBI38568 |
| ProteinID:CBI38568.3 | RefSeq:XP_002278133 | RefSeq:XP_002278133.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00015C85F3 |
| UniProt:D7U754 | wikigene:100244287 | wikigene:LOC100244287 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr16:+:5684825..5685459
Molecular Weight (calculated)
16465.6 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.380
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRSLSSTRV AEDYNINVGS PSSKSPGLRV SVSNEELPVY DPVSEMAKKE RSRIKFAENA VHVIPFVLLL CAIILWVFSN PDVDVGITND SIAARIRGLT
101: LEGDEIDEIN PNNLLPTLDF GELEHSRKQA TDHKALRRTK AKSKSKSK
101: LEGDEIDEIN PNNLLPTLDF GELEHSRKQA TDHKALRRTK AKSKSKSK
001: MYRSASWNRV TEDYSVPWSA PKGLWKGLDE DEPAPYDPTG QEMTKKEKSR TKFAENAVHI IPFVLLACAL VLWFFSNPDV DVGVKGDSIA ARIEGLTIEG
101: DIDNDSDGTQ TGFLGAATEV GHSKNKLKRE ANKRNRRIQA SRKVMKGFY
101: DIDNDSDGTQ TGFLGAATEV GHSKNKLKRE ANKRNRRIQA SRKVMKGFY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q1PDZ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.