CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92188	Soybean	cytosol, mitochondrion, plasma membrane, plastid	96.48	96.48
AT5G07490.1	Thale cress	cytosol	44.37	42.28
VIT_16s0013g00500.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.66	41.89
AT5G61630.1	Thale cress	cytosol, plasma membrane, plastid	42.96	41.5
CDY02126	Canola	cytosol, plasma membrane, plastid	42.96	41.5
Bra005942.1-P	Field mustard	cytosol	43.66	41.33
CDX78297	Canola	cytosol	43.66	41.33
CDY23048	Canola	cytosol	42.96	41.22
Bra029321.1-P	Field mustard	cytosol, plasma membrane, plastid	40.85	38.67
CDY42867	Canola	cytosol, plasma membrane, plastid	40.85	38.67
CDY68478	Canola	cytosol, plasma membrane, plastid	40.85	38.67
KRH77313	Soybean	mitochondrion	21.83	37.35
Bra012935.1-P	Field mustard	cytosol	27.46	33.05
Solyc05g052080.1.1	Tomato	plastid	34.51	32.45

Protein Annotations

EMBL:ACUP02006610	EnsemblPlants:KRH34600	EnsemblPlantsGene:GLYMA_10G193700	EntrezGene:100813926	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR34189	PANTHER:PTHR34189:SF4	ProteinID:KRH34600	ProteinID:KRH34600.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000233D654	UniProt:I1LCI6	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr10:-:42575741..42576665

Molecular Weight (calculated)

15642.4 Da

IEP (calculated)

4.614

GRAVY (calculated)

-0.175

Length

142 amino acids

Sequence
(BLAST)

001: MHRSASWNRF SDDYFKHATT SSPSSGHRSS YSMFDGNNLP TYDPIAELAK RERARVKFAE NAVHVIPLVL IICAIILWLF SNPDVGIIGD PIGARIEGLS
101: LEGEIENDSD GTQMGFLPIV TSEEISTTEI GADKDSIIPK NF

Best Arabidopsis Sequence Match ( AT5G07490.1 )
(BLAST)

001: MYRSASWNRV TEDYSVPWSA PKGLWKGLDE DEPAPYDPTG QEMTKKEKSR TKFAENAVHI IPFVLLACAL VLWFFSNPDV DVGVKGDSIA ARIEGLTIEG
101: DIDNDSDGTQ TGFLGAATEV GHSKNKLKRE ANKRNRRIQA SRKVMKGFY

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q1PDZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.