Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra009166.1-P | |
| Bra010029.1-P | |
| Bra036135.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G30330.1 | Bra009166.1-P | AT5G06140.1 | 20971704 |
| AT2G30330.1 | Bra010029.1-P | AT5G49550.1 | 20971704 |
| AT2G30330.1 | Bra036135.1-P | AT5G49550.1 | 20971704 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G30330.1 | Thale cress | cytosol | 87.42 | 86.84 |
| KRH72791 | Soybean | cytosol | 52.32 | 58.09 |
| Os11t0112300-01 | Rice | cytosol | 49.01 | 57.81 |
| VIT_06s0004g07760.t01 | Wine grape | cytosol, mitochondrion | 56.95 | 57.72 |
| Solyc11g068450.1.1 | Tomato | cytosol | 50.33 | 57.58 |
| PGSC0003DMT400067769 | Potato | cytosol | 49.67 | 56.82 |
| EES07883 | Sorghum | cytosol | 50.33 | 55.47 |
| Os12t0416500-01 | Rice | cytosol | 33.77 | 50.0 |
| TraesCS5B01G147400.1 | Wheat | cytosol | 37.75 | 44.53 |
| TraesCS5D01G144100.1 | Wheat | peroxisome | 35.76 | 42.19 |
| HORVU5Hr1G046970.2 | Barley | cytosol | 37.75 | 40.14 |
| GSMUA_Achr10P... | Banana | cytosol | 52.32 | 39.5 |
| Os12t0111900-00 | Rice | cytosol | 34.44 | 39.1 |
| Zm00001d036838_P001 | Maize | cytosol, plastid | 20.53 | 35.63 |
Protein Annotations
| EnsemblPlants:Bra022792.1 | EnsemblPlants:Bra022792.1-P | EnsemblPlantsGene:Bra022792 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005829 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0031083 |
| GO:GO:0048364 | InterPro:BLOC1S1 | PANTHER:PTHR13073 | PFAM:PF06320 | SEG:seg | UniParc:UPI0002540234 |
| UniProt:M4E1Z2 | MapMan:22.5.3.1 | : | : | : | : |
Description
AT2G30330 (E=2e-064) | GCN5L1 family protein
Coordinates
chrA03:-:7073416..7073946
Molecular Weight (calculated)
17280.6 Da
IEP (calculated)
6.951
GRAVY (calculated)
-0.635
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTPMSMLTS RGRVLPFSEK ERTEEETGTL ESSLLQMIED NRRSSLQLRE KTERSRKEAI RHATRTADLL VKAVNGGVEE CFVNEKRIEA EIRSLAVTVA
101: RFGKQTDQWL AATHAVNSAV KEIGDFENWM KTMEFDCKKI TAAIRNIHED H
101: RFGKQTDQWL AATHAVNSAV KEIGDFENWM KTMEFDCKKI TAAIRNIHED H
001: MNTPMSLSAA RGRMLPFLEK EKSEEESETL ESSLLQLIDD NRRSSLQLRE KTERSRKEAI RHAARTADLL VKAVNGGVEE CFVNEKRIES EIRNLAITVA
101: KFGKQTDQWL AVTHAVNSAV KEIGDFENWM KTMEFDCKKI TAAIRNIHED QQ
101: KFGKQTDQWL AVTHAVNSAV KEIGDFENWM KTMEFDCKKI TAAIRNIHED QQ
Arabidopsis Description
BLOS1Biogenesis of lysosome-related organelles complex 1 subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O22929]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.