Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29185 | Canola | cytosol | 74.33 | 58.31 |
| AT3G58950.1 | Thale cress | cytosol | 48.96 | 39.33 |
| AT3G58890.1 | Thale cress | extracellular | 27.46 | 31.4 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 22.69 | 18.49 |
| Bra003368.1-P | Field mustard | cytosol | 10.45 | 17.16 |
| Bra007435.1-P | Field mustard | cytosol | 1.19 | 3.51 |
Protein Annotations
| EnsemblPlants:Bra024503.1 | EnsemblPlants:Bra024503.1-P | EnsemblPlantsGene:Bra024503 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR31639 | PANTHER:PTHR31639:SF6 | PFAM:PF00646 | PFscan:PS50181 | SMART:SM00256 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI000253F009 | UniProt:M4E6U8 | MapMan:35.1 | : | : |
Description
AT3G58930 (E=3e-091) | F-box family protein
Coordinates
chrA06:-:16251799..16252806
Molecular Weight (calculated)
38438.2 Da
IEP (calculated)
4.560
GRAVY (calculated)
-0.096
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAEKMDRIG SLPEEVLSHI LSFLTTKEAA ITSILSKRWR NLFTLVPNLD IDDSVFLNPE EGKRERDGIL QSFMDFVDRV LALQGDTPIK KFSLKCKTGI
101: DTDRVNRWIR NALQRGVTSL ELVLDFPRHG DDSYMYLLPV EMFVSTKLVE LSLRSDFGVD WWRGGTNTFL PMLKTLTFES KWILLCDDLE VFLSAFPLLE
201: EFYMADIAWP ETDESVSSQS LRKLTIHACG FEDFQNPMSI SFDTPNLVYL AYSDYVAADY PKVNLPNLAE ALLDFKVTGH QIDLIREPDD EDEVSLRLGN
301: VWKLISGLRN VNKLFISAET LEVSCYFPKR QMFLK
101: DTDRVNRWIR NALQRGVTSL ELVLDFPRHG DDSYMYLLPV EMFVSTKLVE LSLRSDFGVD WWRGGTNTFL PMLKTLTFES KWILLCDDLE VFLSAFPLLE
201: EFYMADIAWP ETDESVSSQS LRKLTIHACG FEDFQNPMSI SFDTPNLVYL AYSDYVAADY PKVNLPNLAE ALLDFKVTGH QIDLIREPDD EDEVSLRLGN
301: VWKLISGLRN VNKLFISAET LEVSCYFPKR QMFLK
001: MDRVSNLPDG VRGHILSFLP AKHIALTSVL SKSWLNLWKL IPILDIDDSE FLHPEEGKAE RLEIRQSFVD FVDRVLALQD DSPIDRFSLK CITGIHPDHV
101: NRWICNVLQR GVSDLDLFID FSYEDTQEDE DMLPQEMFVS KTLVKLKIRN DRCVDWWCGK GGTSLPMLKS LYIDSDLILW GKMKRFLSSF PVLEELRMAS
201: MEWKESHETV SSASLRKLSI LGTGCEDYVN PKSISFDTPS LLYLNYSDLV AEDYPLVNMG KLLEARINLI VKDDQIKRVR EPNNDLLQDD AGNVVLQFGN
301: VVKLMNGIQN IQILYLTADT LEVLSLCCES MPVFNNLKTL GIKSEEGRGW QAVPALLRNC PHLEYLIIEG LLHNVTDKCG DACDCISRED KGRSLASCPV
401: KKVEIQGFRG TMREINMIGH FLRSFKCLKE MGIFPEEEGP TNFENPGAFE YVEKILKLYN EISNCDVYFL VWGYMRRKWT TQ
101: NRWICNVLQR GVSDLDLFID FSYEDTQEDE DMLPQEMFVS KTLVKLKIRN DRCVDWWCGK GGTSLPMLKS LYIDSDLILW GKMKRFLSSF PVLEELRMAS
201: MEWKESHETV SSASLRKLSI LGTGCEDYVN PKSISFDTPS LLYLNYSDLV AEDYPLVNMG KLLEARINLI VKDDQIKRVR EPNNDLLQDD AGNVVLQFGN
301: VVKLMNGIQN IQILYLTADT LEVLSLCCES MPVFNNLKTL GIKSEEGRGW QAVPALLRNC PHLEYLIIEG LLHNVTDKCG DACDCISRED KGRSLASCPV
401: KKVEIQGFRG TMREINMIGH FLRSFKCLKE MGIFPEEEGP TNFENPGAFE YVEKILKLYN EISNCDVYFL VWGYMRRKWT TQ
Arabidopsis Description
F-box/LRR-repeat protein At3g58930 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXW6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.