Factsheet for Bra029150.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38887	Canola	cytosol	100.0	100.0
Bra028288.1-P	Field mustard	cytosol	94.74	15.61
Bra010185.1-P	Field mustard	cytosol	31.58	7.11
Bra023290.1-P	Field mustard	cytosol	31.58	4.57
Bra003690.1-P	Field mustard	cytosol	29.82	4.49
Bra025081.1-P	Field mustard	cytosol	29.82	4.37
Bra031208.1-P	Field mustard	cytosol	28.07	4.19
Bra038649.1-P	Field mustard	mitochondrion	31.58	4.14
Bra031390.1-P	Field mustard	cytosol	28.07	4.11
Bra013586.1-P	Field mustard	cytosol	15.79	4.02
Bra015693.1-P	Field mustard	cytosol	26.32	3.96
Bra033706.1-P	Field mustard	cytosol	26.32	3.96
Bra027516.1-P	Field mustard	extracellular	26.32	3.69
Bra020469.1-P	Field mustard	cytosol	24.56	3.68
Bra012327.1-P	Field mustard	cytosol	26.32	2.51
Bra037749.1-P	Field mustard	cytosol	1.75	0.53

Protein Annotations

EnsemblPlants:Bra029150.1	EnsemblPlants:Bra029150.1-P	EnsemblPlantsGene:Bra029150	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43161
PANTHER:PTHR43161:SF8	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00025400E2	UniProt:M4EK33	MapMan:35.1

Description

AT5G51970 (E=4e-025) | sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative

Coordinates

chrA03:-:6578137..6578310

Molecular Weight (calculated)

5984.4 Da

IEP (calculated)

6.494

GRAVY (calculated)

0.523

Length

57 amino acids

Sequence
(BLAST)

1: MCEPLSVGVH ACRRAEVGPE THVLVMGAGP IGLVTMLAAR AFGVPRIVIV DVDDNRS

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.