Factsheet for Bra028288.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00508	Canola	cytosol	98.55	98.55
Bra029150.1-P	Field mustard	cytosol	15.61	94.74
CDY58156	Canola	cytosol	97.98	93.13
AT5G51970.1	Thale cress	cytosol	95.95	91.21
PGSC0003DMT400081907	Potato	cytosol	86.71	86.71
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	86.42	84.23
KRH09146	Soybean	cytosol, nucleus	86.42	82.14
VIT_16s0100g00300.t01	Wine grape	cytosol	85.55	81.1
GSMUA_Achr4P19640_001	Banana	cytosol	83.81	79.67
TraesCS7D01G269800.1	Wheat	cytosol	80.35	76.16
TraesCS7B01G167500.1	Wheat	cytosol	80.35	76.16
TraesCS7A01G269300.1	Wheat	cytosol	80.35	76.16
EES15252	Sorghum	cytosol	80.64	75.0
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	79.19	74.25
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	78.03	73.77
GSMUA_Achr4P19630_001	Banana	cytosol	32.37	72.73
HORVU7Hr1G056770.2	Barley	cytosol	79.77	66.83
KRH38627	Soybean	cytosol	84.97	63.77
Bra037749.1-P	Field mustard	cytosol	13.58	25.13
Bra025081.1-P	Field mustard	cytosol	25.72	22.88
Bra038649.1-P	Field mustard	mitochondrion	28.61	22.76
Bra033706.1-P	Field mustard	cytosol	24.86	22.69
Bra003690.1-P	Field mustard	cytosol	24.57	22.43
Bra023290.1-P	Field mustard	cytosol	25.43	22.34
Bra015693.1-P	Field mustard	cytosol	24.28	22.16
Bra031390.1-P	Field mustard	cytosol	24.28	21.59
Bra031208.1-P	Field mustard	cytosol	23.7	21.47
Bra010185.1-P	Field mustard	cytosol	15.61	21.34
Bra020469.1-P	Field mustard	cytosol	23.12	21.05
Bra027516.1-P	Field mustard	extracellular	24.57	20.94
Bra013586.1-P	Field mustard	cytosol	11.56	17.86
Bra012327.1-P	Field mustard	cytosol	23.41	13.57

Protein Annotations

Gene3D:3.40.50.720	MapMan:3.5.2	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EnsemblPlantsGene:Bra028288	EnsemblPlants:Bra028288.1	EnsemblPlants:Bra028288.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0003939	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009506	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M4EHM3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002543BA1	:	:	:

Description

AT5G51970 (E=5e-196) | sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative

Coordinates

chrA01:-:18916622..18917971

Molecular Weight (calculated)

37328.8 Da

IEP (calculated)

6.759

GRAVY (calculated)

0.213

Length

346 amino acids

Sequence
(BLAST)

001: MAAWLVGLNT LKIQPFPLPS LGPHDVRVRM KAVGICGSDV HYLKTMRCAD FIVKEPMVIG HECAGIIEEV GEEVKHLVVG DRVALEPGIS CWRCNLCKEG
101: RYNLCPEMKF FATPPVHGSL ANQVVHPADL CFKLPENVSL EEGAMCEPLS VGVHACRRAE VGPETNVLVM GAGPIGLVTM LAARAFGVPK IVIVDVDDNR
201: LSVAKQLGAY GIVKVTTSLE DVGSEVEQIQ KTMGSNIDVT FDCAGFNKTM STALAATRCG GKVCLVGMGH GIMTVPLTPA AAREVDVVGV FRYKNTWPLC
301: LEFLTSGKID VKPLITHRFG FSQKEVEDAF ETSARGSNAI KVMFNL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.